CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF3g03552
(
Pseudozyma brasiliensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PSEUBRA_SCAF3g03552
T332214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST06041
Sox
330
400
PKQAPSAWQIFFTEELQKIKAQSPDERLNVAHVAKDAGQRYAALPESKKQEFHRRSLEAKEQWEQEMADWK
EST06041
Sox
435
507
PKKPLSAYFLFLRAIRADPNMTQAVFEGEQETTKQSVLAAAKWRSLSETEKQPYLDRAEADKARYERLRREYE
Links
Other
Sox
family TFs
Other
Pseudozyma brasiliensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
sr12460
Sporisorium reilianum
sr12460
N
0.741
PAN0_007d3117
Pseudozyma antarctica
PAN0_007d3117
N
0.741
UHOR_02084
Ustilago hordei
UHOR_02084
N
0.737
UM01390
Ustilago maydis
UM01390
N
0.737
PHSY_004430
Pseudozyma hubeiensis
PHSY_004430
N
0.728
PaG_03069
Pseudozyma aphidis
PaG_03069
N
0.728
PFL1_04035
Pseudozyma flocculosa
PFL1_04035
N
0.643
K437DRAFT_223452
Tilletiaria anomala
K437DRAFT_223452
N
0.618
V565_038130
Rhizoctonia solani
V565_038130
N
0.508
L804_02037
Cryptococcus gattii
L804_02037
N
0.506
CNA04270
Cryptococcus neoformans
CNA04270
N
0.506
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.493
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.449
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.448
EDP42964.1
Malassezia globosa
EDP42964.1
N
0.447
M408DRAFT_74753
Serendipita vermifera
M408DRAFT_74753
N
0.445