PISMIDRAFT_684224 (Pisolithus microcarpus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PISMIDRAFT_684224 T332044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.440 0.370
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.440 0.370
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK18346 Sox 16 61

Links

Other Sox family TFs
Other Pisolithus microcarpus TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PISMIDRAFT_671062 Pisolithus microcarpus PISMIDRAFT_671062 I 0.668
GLOTRDRAFT_11089 Gloeophyllum trabeum GLOTRDRAFT_11089 I 0.661
JAAARDRAFT_119170 Jaapia argillacea JAAARDRAFT_119170 I 0.661
PAXRUDRAFT_821077 Paxillus rubicundulus PAXRUDRAFT_821077 I 0.657
PLEOSDRAFT_155914 Pleurotus ostreatus PLEOSDRAFT_155914 I 0.651
GALMADRAFT_234655 Galerina marginata GALMADRAFT_234655 N 0.648
CY34DRAFT_799168 Suillus luteus CY34DRAFT_799168 I 0.623
SCHCODRAFT_73620 Schizophyllum commune SCHCODRAFT_73620 N 0.617
M404DRAFT_998370 Pisolithus tinctorius M404DRAFT_998370 N 0.616
SCLCIDRAFT_19032 Scleroderma citrinum SCLCIDRAFT_19032 I 0.616
K443DRAFT_87716 Laccaria amethystina K443DRAFT_87716 N 0.611
LACBIDRAFT_301226 Laccaria bicolor LACBIDRAFT_301226 N 0.611
M378DRAFT_228709 Amanita muscaria M378DRAFT_228709 N 0.581
M407DRAFT_126438 Tulasnella calospora M407DRAFT_126438 I 0.544
CC1G_06617 Coprinopsis cinerea CC1G_06617 N 0.541
DACRYDRAFT_54873 Dacryopinax sp DACRYDRAFT_54873 I 0.538
M422DRAFT_175451 Sphaerobolus stellatus M422DRAFT_175451 I 0.536
PILCRDRAFT_822980 Piloderma croceum PILCRDRAFT_822980 I 0.536
GLOINDRAFT_337448 Rhizophagus irregularis GLOINDRAFT_337448 I 0.528
PHACADRAFT_247984 Phanerochaete carnosa PHACADRAFT_247984 N 0.525
HETIRDRAFT_308278 Heterobasidion irregulare HETIRDRAFT_308278 I 0.512
e_gw1.1.2342.1 Heterobasidion annosum e_gw1.1.2342.1 I 0.512
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.474
E5Q_04235 Mixia osmundae E5Q_04235 I 0.473
E5Q_04236 Mixia osmundae E5Q_04236 I 0.473
AMAG_00993 Allomyces macrogynus AMAG_00993 I 0.466
K437DRAFT_256012 Tilletiaria anomala K437DRAFT_256012 I 0.460
Cla000824 Citrullus lanatus Cla000824 I 0.454
Cucsa.394330 Cucumis sativus Cucsa.394330 I 0.454
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.449
GSMUA_Achr3G25660_001 Musa acuminata GSMUA_Achr3G25660_001 I 0.446
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.446
BOTBODRAFT_110075 Botryobasidium botryosum BOTBODRAFT_110075 N 0.445
M407DRAFT_28999 Tulasnella calospora M407DRAFT_28999 N 0.443
AMTR_s00047p00199030 Amborella trichopoda AMTR_s00047p00199030 I 0.440
CRC Arabidopsis thaliana AT1G69180 D 0.440
BGIOSGA012115 Oryza indica BGIOSGA012115 I 0.440
Bo6g108630 Brassica oleracea Bo6g108630 I 0.440
Bra004364 Brassica rapa Bra004364 I 0.440
BRADI1G69900 Brachypodium distachyon BRADI1G69900 I 0.440
CRC Arabidopsis lyrata fgenesh2_kg.2__1172__AT1G69180.1 I 0.440
GLYMA01G08030 Glycine max GLYMA01G08030 I 0.440
GLYMA02G13350 Glycine max GLYMA02G13350 I 0.440
GRMZM2G088309 Zea mays GRMZM2G088309 I 0.440
GRMZM2G102218 Zea mays GRMZM2G102218 I 0.440
GSMUA_Achr3G25290_001 Musa acuminata GSMUA_Achr3G25290_001 I 0.440
GSMUA_Achr4G01430_001 Musa acuminata GSMUA_Achr4G01430_001 I 0.440
GSMUA_Achr5G08930_001 Musa acuminata GSMUA_Achr5G08930_001 I 0.440
GSMUA_Achr6G24550_001 Musa acuminata GSMUA_Achr6G24550_001 I 0.440
GSMUA_Achr8G04340_001 Musa acuminata GSMUA_Achr8G04340_001 I 0.440
LPERR03G07620 Leersia perrieri LPERR03G07620 I 0.440
OB03G18700 Oryza brachyantha OB03G18700 I 0.440
OBART03G08320 Oryza barthii OBART03G08320 I 0.440
OGLUM03G08460 Oryza glumaepatula OGLUM03G08460 I 0.440
OLONG_009200 Oryza longistaminata OLONG_009200 I 0.440
OMERI03G08070 Oryza meridionalis OMERI03G08070 I 0.440
ONIVA03G09180 Oryza nivara ONIVA03G09180 I 0.440
OPUNC03G08080 Oryza punctata OPUNC03G08080 I 0.440
ORGLA03G0081000 Oryza glaberrima ORGLA03G0081000 I 0.440
ORUFI03G08400 Oryza rufipogon ORUFI03G08400 I 0.440
OS03G0215200 Oryza sativa OS03G0215200 I 0.440
PGSC0003DMG400028360 Solanum tuberosum PGSC0003DMG400028360 I 0.440
POPTR_0008s09740 Populus trichocarpa POPTR_0008s09740 I 0.440
PRUPE_ppa014900mg Prunus persica PRUPE_ppa014900mg I 0.440
Sb01g042850 Sorghum bicolor Sb01g042850 I 0.440
Si037608m.g Setaria italica Si037608m.g I 0.440
Solyc05g012050.2 Solanum lycopersicum Solyc05g012050.2 I 0.440
TCM_011484 Theobroma cacao TCM_011484 I 0.440
Traes_4AS_BE972A2661 Triticum aestivum Traes_4AS_BE972A2661 I 0.440
Traes_4AS_BE972A266 Triticum aestivum Traes_4AS_BE972A266 I 0.440
Traes_4BL_34FE2C7F2 Triticum aestivum Traes_4BL_34FE2C7F2 I 0.440
TRIUR3_31693 Triticum urartu TRIUR3_31693 I 0.440
CRC Vitis vinifera VIT_01s0011g00140 I 0.440
Ca_12379 Cicer arietinum Ca_12379 I 0.440
Ca_18533 Cicer arietinum Ca_18533 I 0.440
Cla010397 Citrullus lanatus Cla010397 I 0.440
Pm030598 Prunus mume Pm030598 I 0.440
30174.m009083 Ricinus communis 30174.m009083 I 0.440
cassava10710.m1 Manihot esculenta cassava10710.m1 I 0.440
cassava39135.m1 Manihot esculenta cassava39135.m1 I 0.440
Cucsa.284430 Cucumis sativus Cucsa.284430 I 0.440
mgf001016m Mimulus guttatus mgf001016m I 0.440
mgf007067m Mimulus guttatus mgf007067m I 0.440
Bostr.10273s0455 Boechera stricta Bostr.10273s0455 I 0.440
Cagra.0537s0004 Capsella grandiflora Cagra.0537s0004 I 0.440
Carubv10021641m.g Capsella rubella Carubv10021641m.g I 0.440
Ciclev10033770m.g Citrus clementina Ciclev10033770m.g I 0.440
Eucgr.B03140 Eucalyptus grandis Eucgr.B03140 I 0.440
evm.TU.contig_30608 Carica papaya evm.TU.contig_30608 I 0.440
gene04566-v1.0-hybrid Fragaria vesca gene04566-v1.0-hybrid I 0.440
Gorai.005G146700 Gossypium raimondii Gorai.005G146700 I 0.440
Lus10036811.g Linum usitatissimum Lus10036811.g I 0.440
MDP0000124879 Malus domestica MDP0000124879 I 0.440
MDP0000171878 Malus domestica MDP0000171878 I 0.440
MDP0000291729 Malus domestica MDP0000291729 I 0.440
Pavir.Ia04690 Panicum virgatum Pavir.Ia04690 I 0.440
Pavir.Ib00755 Panicum virgatum Pavir.Ib00755 I 0.440
SapurV1A.0176s0460 Salix purpurea SapurV1A.0176s0460 I 0.440
Thhalv10019126m.g Eutrema salsugineum Thhalv10019126m.g I 0.440
PK13838.1 Cannabis sativa PK13838.1 I 0.440
PDK_20s1325902g001 Phoenix dactylifera PDK_20s1325902g001 I 0.440
GSMUA_Achr5G23610_001 Musa acuminata GSMUA_Achr5G23610_001 I 0.438
LPERR07G16630 Leersia perrieri LPERR07G16630 I 0.438
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.438
GSMUA_Achr4G22750_001 Musa acuminata GSMUA_Achr4G22750_001 I 0.435
GSMUA_Achr4G31310_001 Musa acuminata GSMUA_Achr4G31310_001 I 0.435
POPTR_0010s16410 Populus trichocarpa POPTR_0010s16410 I 0.434
SapurV1A.0072s0330 Salix purpurea SapurV1A.0072s0330 I 0.434
GSMUA_Achr1G04480_001 Musa acuminata GSMUA_Achr1G04480_001 I 0.433
GSMUA_Achr1G24490_001 Musa acuminata GSMUA_Achr1G24490_001 I 0.433
GSMUA_Achr1G27150_001 Musa acuminata GSMUA_Achr1G27150_001 I 0.433
BGIOSGA025976 Oryza indica BGIOSGA025976 I 0.432
OB07G25220 Oryza brachyantha OB07G25220 I 0.432
OLONG_001420 Oryza longistaminata OLONG_001420 I 0.432
OMERI07G16070 Oryza meridionalis OMERI07G16070 I 0.432
ORGLA07G0250200 Oryza glaberrima ORGLA07G0250200 I 0.432
PaG_05633 Pseudozyma aphidis PaG_05633 I 0.432
PAN0_018d5604 Pseudozyma antarctica PAN0_018d5604 I 0.432
sr16632 Sporisorium reilianum sr16632 I 0.432
UHOR_08529 Ustilago hordei UHOR_08529 I 0.432
UM06001 Ustilago maydis UM06001 I 0.432
SPPG_01639 Spizellomyces punctatus SPPG_01639 I 0.431
GLOINDRAFT_342259 Rhizophagus irregularis GLOINDRAFT_342259 I 0.431
MVLG_01899 Microbotryum violaceum MVLG_01899 N 0.426
Eucgr.B03310 Eucalyptus grandis Eucgr.B03310 I 0.425
PFL1_06190 Pseudozyma flocculosa PFL1_06190 I 0.423
GSMUA_AchrUn_randomG19410_001 Musa acuminata GSMUA_AchrUn_randomG19410_001 I 0.421
BOTBODRAFT_39377 Botryobasidium botryosum BOTBODRAFT_39377 I 0.418
BRADI1G57070 Brachypodium distachyon BRADI1G57070 I 0.416
EMIHUDRAFT_208774 Emiliania huxleyi EMIHUDRAFT_208774 N 0.416
GLYMA04G10125 Glycine max GLYMA04G10125 I 0.416
GLYMA06G10110 Glycine max GLYMA06G10110 I 0.416
GLYMA08G39290 Glycine max GLYMA08G39290 I 0.416
GLYMA18G19720 Glycine max GLYMA18G19720 I 0.416
GSMUA_Achr3G15060_001 Musa acuminata GSMUA_Achr3G15060_001 I 0.416
GSMUA_Achr8G04750_001 Musa acuminata GSMUA_Achr8G04750_001 I 0.416
GSMUA_Achr8G26600_001 Musa acuminata GSMUA_Achr8G26600_001 I 0.416
MTR_5g034030 Medicago truncatula MTR_5g034030 I 0.416
POPTR_0010s05220 Populus trichocarpa POPTR_0010s05220 I 0.416
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.416
Solyc05g005240.1 Solanum lycopersicum Solyc05g005240.1 I 0.416
INO Vitis vinifera VIT_01s0127g00330 I 0.416
Ca_21472 Cicer arietinum Ca_21472 I 0.416
Pm006709 Prunus mume Pm006709 I 0.416
cassava41595.m1 Manihot esculenta cassava41595.m1 I 0.416
mgf023167m Mimulus guttatus mgf023167m I 0.416
Cagra.0605s0067 Capsella grandiflora Cagra.0605s0067 I 0.416
Carubv10012024m.g Capsella rubella Carubv10012024m.g I 0.416
Lus10013028.g Linum usitatissimum Lus10013028.g I 0.416
Lus10029135.g Linum usitatissimum Lus10029135.g I 0.416
MDP0000126221 Malus domestica MDP0000126221 I 0.416
MDP0000263713 Malus domestica MDP0000263713 I 0.416
orange1.1g037247m.g Citrus sinensis orange1.1g037247m.g I 0.416
SapurV1A.0069s0070 Salix purpurea SapurV1A.0069s0070 I 0.416
SapurV1A.0269s0230 Salix purpurea SapurV1A.0269s0230 I 0.416
chr2.CM0008.270.nc Lotus japonicus chr2.CM0008.270.nc I 0.416