CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_73620
(
Schizophyllum commune
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCHCODRAFT_73620
T332474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ03953
Sox
25
71
GKKKLSEFNKFMKQELSRLKEAEPDITHQERFKLATANWKNAKPKKD
Links
Other
Sox
family TFs
Other
Schizophyllum commune
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
JAAARDRAFT_119170
Jaapia argillacea
JAAARDRAFT_119170
I
0.650
PISMIDRAFT_671062
Pisolithus microcarpus
PISMIDRAFT_671062
I
0.624
GLOTRDRAFT_11089
Gloeophyllum trabeum
GLOTRDRAFT_11089
I
0.621
M404DRAFT_998370
Pisolithus tinctorius
M404DRAFT_998370
N
0.618
CY34DRAFT_799168
Suillus luteus
CY34DRAFT_799168
I
0.617
PAXRUDRAFT_821077
Paxillus rubicundulus
PAXRUDRAFT_821077
I
0.617
PISMIDRAFT_684224
Pisolithus microcarpus
PISMIDRAFT_684224
I
0.617
GALMADRAFT_234655
Galerina marginata
GALMADRAFT_234655
N
0.613
K443DRAFT_87716
Laccaria amethystina
K443DRAFT_87716
N
0.612
PLEOSDRAFT_155914
Pleurotus ostreatus
PLEOSDRAFT_155914
I
0.611
SCLCIDRAFT_19032
Scleroderma citrinum
SCLCIDRAFT_19032
I
0.611
LACBIDRAFT_301226
Laccaria bicolor
LACBIDRAFT_301226
N
0.577
CC1G_06617
Coprinopsis cinerea
CC1G_06617
N
0.565
M378DRAFT_228709
Amanita muscaria
M378DRAFT_228709
N
0.562
M422DRAFT_175451
Sphaerobolus stellatus
M422DRAFT_175451
I
0.552
PILCRDRAFT_822980
Piloderma croceum
PILCRDRAFT_822980
I
0.530
HETIRDRAFT_308278
Heterobasidion irregulare
HETIRDRAFT_308278
I
0.506
e_gw1.1.2342.1
Heterobasidion annosum
e_gw1.1.2342.1
I
0.506
M407DRAFT_28999
Tulasnella calospora
M407DRAFT_28999
N
0.493
DACRYDRAFT_54873
Dacryopinax sp
DACRYDRAFT_54873
I
0.491
M407DRAFT_126438
Tulasnella calospora
M407DRAFT_126438
I
0.491
GLOINDRAFT_337448
Rhizophagus irregularis
GLOINDRAFT_337448
I
0.488
PHACADRAFT_247984
Phanerochaete carnosa
PHACADRAFT_247984
N
0.481
AMTR_s00096p00054100
Amborella trichopoda
AMTR_s00096p00054100
I
0.470
cassava26804.m1
Manihot esculenta
cassava26804.m1
I
0.468
GUITHDRAFT_163519
Guillardia theta
GUITHDRAFT_163519
I
0.462
E5Q_04235
Mixia osmundae
E5Q_04235
I
0.460
E5Q_04236
Mixia osmundae
E5Q_04236
I
0.460
AMAG_00993
Allomyces macrogynus
AMAG_00993
I
0.459
GSMUA_Achr5G23610_001
Musa acuminata
GSMUA_Achr5G23610_001
I
0.459
LPERR07G16630
Leersia perrieri
LPERR07G16630
I
0.459
PDK_20s1781371g001
Phoenix dactylifera
PDK_20s1781371g001
I
0.459
BGIOSGA025976
Oryza indica
BGIOSGA025976
I
0.453
OB07G25220
Oryza brachyantha
OB07G25220
I
0.453
OLONG_001420
Oryza longistaminata
OLONG_001420
I
0.453
OMERI07G16070
Oryza meridionalis
OMERI07G16070
I
0.453
ORGLA07G0250200
Oryza glaberrima
ORGLA07G0250200
I
0.453
EMIHUDRAFT_208774
Emiliania huxleyi
EMIHUDRAFT_208774
N
0.451
UHOR_08529
Ustilago hordei
UHOR_08529
I
0.447
BOTBODRAFT_39377
Botryobasidium botryosum
BOTBODRAFT_39377
I
0.446
K437DRAFT_256012
Tilletiaria anomala
K437DRAFT_256012
I
0.442
GLYMA06G10110
Glycine max
GLYMA06G10110
I
0.438
PRUPE_ppa023883mg
Prunus persica
PRUPE_ppa023883mg
I
0.438
Solyc05g005240.1
Solanum lycopersicum
Solyc05g005240.1
I
0.438
INO
Vitis vinifera
VIT_01s0127g00330
I
0.438
Pm006709
Prunus mume
Pm006709
I
0.438
mgf023167m
Mimulus guttatus
mgf023167m
I
0.438
AZW_EuGene.0200010417
Micromonas sp RCC299
AZW_EuGene.0200010417
I
0.438
MDP0000126221
Malus domestica
MDP0000126221
I
0.438
MDP0000263713
Malus domestica
MDP0000263713
I
0.438
GSMUA_Achr3G25660_001
Musa acuminata
GSMUA_Achr3G25660_001
I
0.433
Cla010239
Citrullus lanatus
Cla010239
I
0.432
evm.TU.supercontig_69.72
Carica papaya
evm.TU.supercontig_69.72
I
0.432
AMTR_s00004p00165390
Amborella trichopoda
AMTR_s00004p00165390
I
0.427
AMTR_s00085p00032940
Amborella trichopoda
AMTR_s00085p00032940
I
0.427
BGIOSGA014650
Oryza indica
BGIOSGA014650
I
0.427
BRADI3G50050
Brachypodium distachyon
BRADI3G50050
I
0.427
BRADI5G16910
Brachypodium distachyon
BRADI5G16910
I
0.427
F775_25525
Aegilops tauschii
F775_25525
I
0.427
F775_27799
Aegilops tauschii
F775_27799
I
0.427
GLYMA05G04260
Glycine max
GLYMA05G04260
I
0.427
GLYMA17G14710
Glycine max
GLYMA17G14710
I
0.427
GRMZM2G005353
Zea mays
GRMZM2G005353
I
0.427
GRMZM2G046829
Zea mays
GRMZM2G046829
I
0.427
GRMZM2G054795
Zea mays
GRMZM2G054795
I
0.427
GRMZM2G529859
Zea mays
GRMZM2G529859
I
0.427
GSMUA_Achr11G03800_001
Musa acuminata
GSMUA_Achr11G03800_001
I
0.427
GSMUA_Achr11G17520_001
Musa acuminata
GSMUA_Achr11G17520_001
I
0.427
GSMUA_Achr7G07130_001
Musa acuminata
GSMUA_Achr7G07130_001
I
0.427
GSMUA_Achr8G11580_001
Musa acuminata
GSMUA_Achr8G11580_001
I
0.427
LPERR04G16190
Leersia perrieri
LPERR04G16190
I
0.427
MLOC_60897
Hordeum vulgare
MLOC_60897
I
0.427
MTR_4g101660
Medicago truncatula
MTR_4g101660
I
0.427
OB04G27010
Oryza brachyantha
OB04G27010
I
0.427
OBART04G20010
Oryza barthii
OBART04G20010
I
0.427
OGLUM04G19890
Oryza glumaepatula
OGLUM04G19890
I
0.427
OMERI04G17000
Oryza meridionalis
OMERI04G17000
I
0.427
ONIVA04G18220
Oryza nivara
ONIVA04G18220
I
0.427
ORGLA04G0171000
Oryza glaberrima
ORGLA04G0171000
I
0.427
ORUFI04G21570
Oryza rufipogon
ORUFI04G21570
I
0.427
YAB5
Oryza sativa
OS04G0536300
I
0.427
PGSC0003DMG400002883
Solanum tuberosum
PGSC0003DMG400002883
I
0.427
Sb04g033590
Sorghum bicolor
Sb04g033590
I
0.427
Sb06g023770
Sorghum bicolor
Sb06g023770
I
0.427
Si010859m.g
Setaria italica
Si010859m.g
I
0.427
Si018146m.g
Setaria italica
Si018146m.g
I
0.427
Solyc12g009580.1
Solanum lycopersicum
Solyc12g009580.1
I
0.427
TCM_016030
Theobroma cacao
TCM_016030
I
0.427
TCM_031868
Theobroma cacao
TCM_031868
I
0.427
Traes_2AL_71DE02042
Triticum aestivum
Traes_2AL_71DE02042
I
0.427
Traes_2BL_8BEA9CE1B
Triticum aestivum
Traes_2BL_8BEA9CE1B
I
0.427
Traes_6AL_2983D4EB6
Triticum aestivum
Traes_6AL_2983D4EB6
I
0.427
Traes_6BL_3F8DB6043
Triticum aestivum
Traes_6BL_3F8DB6043
I
0.427
Traes_6DL_59DB06B9F
Triticum aestivum
Traes_6DL_59DB06B9F
I
0.427
TRIUR3_29073
Triticum urartu
TRIUR3_29073
I
0.427
VIT_02s0154g00070
Vitis vinifera
VIT_02s0154g00070
I
0.427
YAB2
Vitis vinifera
VIT_06s0009g00880
I
0.427
Cla016962
Citrullus lanatus
Cla016962
I
0.427
Cucsa.132170
Cucumis sativus
Cucsa.132170
I
0.427
mgf009982m
Mimulus guttatus
mgf009982m
I
0.427
evm.TU.supercontig_29.121
Carica papaya
evm.TU.supercontig_29.121
I
0.427
Gorai.002G054200
Gossypium raimondii
Gorai.002G054200
I
0.427
Gorai.008G236500
Gossypium raimondii
Gorai.008G236500
I
0.427
Lus10019407.g
Linum usitatissimum
Lus10019407.g
I
0.427
Pavir.Aa01223
Panicum virgatum
Pavir.Aa01223
I
0.427
Pavir.Ab02534
Panicum virgatum
Pavir.Ab02534
I
0.427
Pavir.Ga00891
Panicum virgatum
Pavir.Ga00891
I
0.427
Pavir.Gb00743
Panicum virgatum
Pavir.Gb00743
I
0.427
GSMUA_Achr4G22750_001
Musa acuminata
GSMUA_Achr4G22750_001
I
0.423
GSMUA_Achr4G31310_001
Musa acuminata
GSMUA_Achr4G31310_001
I
0.423
fgenesh2_pg.C_Chr_03000283
Micromonas sp RCC299
fgenesh2_pg.C_Chr_03000283
N
0.421
Pavir.Ba00601
Panicum virgatum
Pavir.Ba00601
I
0.421
Pavir.Bb03145
Panicum virgatum
Pavir.Bb03145
I
0.421
MVLG_01899
Microbotryum violaceum
MVLG_01899
N
0.420