CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR004984
(
Strigamia maritima
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SMAR004984
T332619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SOX15
M03508_2.00
Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT
SELEX
Jolma et al.(2013)
SOX15_1
0.440
0.420
SOX15
M03509_2.00
Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT
SELEX
Jolma et al.(2013)
SOX15_2
0.440
0.420
SOX15
M03510_2.00
Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT
SELEX
Jolma et al.(2013)
SOX15_3
0.440
0.420
SOX15
M05893_2.00
Homo sapiens
YYWTTGTNHN
NDNACAAWRR
SMiLE-seq
Isakova et al.(2017)
SOX15
0.440
0.420
SOX15
M11308_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX15_Q3
0.440
0.420
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA
TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.424
0.333
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN
NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.418
0.348
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.418
0.362
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR004984-PA
Sox
1302
1370
VKRPPNAFIRFSVAFRKLVANDFPNKSNREISQMLGTIWRKMSKKEKQPFVTEFYAELQRTRRDHPEWN
Links
Other
Sox
family TFs
Other
Strigamia maritima
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHUM605170
Pediculus humanus
PHUM605170
I
0.486
SMAR001063
Strigamia maritima
SMAR001063
I
0.475
Ocbimv22035960m.g
Octopus bimaculoides
Ocbimv22035960m.g
I
0.462
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.462
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.462
SOX15
Echinops telfairi
ENSETEG00000018611
I
0.461
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.459
AEPI004245
Anopheles epiroticus
AEPI004245
I
0.453
L798_04766
Zootermopsis nevadensis
L798_04766
I
0.451
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.450
RSKR_0000077800
Rhabditophanes kr3021
RSKR_0000077800
I
0.450
GB51010
Apis mellifera
GB51010
I
0.449
NV14822
Nasonia vitripennis
NV14822
I
0.449
TC007345
Tribolium castaneum
TC007345
I
0.447
CGI_10006950
Crassostrea gigas
CGI_10006950
I
0.443
ENSFALG00000008470
Ficedula albicollis
ENSFALG00000008470
I
0.443
ENSTGUG00000000620
Taeniopygia guttata
ENSTGUG00000000620
I
0.443
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.443
Gfo_R013263
Geospiza fortis
Gfo_R013263
I
0.443
SOX15
Bos taurus
ENSBTAG00000005461
I
0.440
SOX15
Canis familiaris
ENSCAFG00000016662
I
0.440
SOX15
Callithrix jacchus
ENSCJAG00000015111
I
0.440
SOX15
Cavia porcellus
ENSCPOG00000004915
I
0.440
ENSCSAG00000011393
Chlorocebus sabaeus
ENSCSAG00000011393
I
0.440
ENSDNOG00000004931
Dasypus novemcinctus
ENSDNOG00000004931
I
0.440
Sox15
Dipodomys ordii
ENSDORG00000014230
I
0.440
SOX15
Equus caballus
ENSECAG00000007026
I
0.440
SOX15
Erinaceus europaeus
ENSEEUG00000013305
I
0.440
SOX15
Felis catus
ENSFCAG00000009619
I
0.440
SOX15
Homo sapiens
ENSG00000129194
D
0.440
SOX15
Gorilla gorilla
ENSGGOG00000027463
I
0.440
SOX15
Loxodonta africana
ENSLAFG00000001112
I
0.440
ENSMICG00000014795
Microcebus murinus
ENSMICG00000014795
I
0.440
SOX15
Myotis lucifugus
ENSMLUG00000003435
I
0.440
ENSMPUG00000009383
Mustela putorius furo
ENSMPUG00000009383
I
0.440
ENSNLEG00000009660
Nomascus leucogenys
ENSNLEG00000009660
I
0.440
ENSOARG00000014928
Ovis aries
ENSOARG00000014928
I
0.440
SOX15
Oryctolagus cuniculus
ENSOCUG00000001100
I
0.440
SOX15
Otolemur garnettii
ENSOGAG00000008145
I
0.440
SOX15
Ochotona princeps
ENSOPRG00000017106
I
0.440
ENSPANG00000024056
Papio anubis
ENSPANG00000024056
I
0.440
SOX15
Pan troglodytes
ENSPTRG00000008697
I
0.440
SOX15
Pteropus vampyrus
ENSPVAG00000016305
I
0.440
SOX15
Sus scrofa
ENSSSCG00000017954
I
0.440
ENSSTOG00000005654
Ictidomys tridecemlineatus
ENSSTOG00000005654
I
0.440
SOX15
Tupaia belangeri
ENSTBEG00000009566
I
0.440
SOX15
Tursiops truncatus
ENSTTRG00000010225
I
0.440
SOX15
Vicugna pacos
ENSVPAG00000000146
I
0.440
ENSBTAP00000007184-D1
Bos grunniens
ENSBTAP00000007184-D1
I
0.440
ENSP00000355354
Macaca fascicularis
ENSP00000355354
I
0.440
Myotis_brandtii_SOX15_10021054
Myotis brandtii
Myotis_brandtii_SOX15_10021054
I
0.440
ENSAPLG00000013850
Anas platyrhynchos
ENSAPLG00000013850
I
0.439
ENSLACG00000015447
Latimeria chalumnae
ENSLACG00000015447
I
0.438
LotgiG167034
Lottia gigantea
LotgiG167034
N
0.438
HelroG77188
Helobdella robusta
HelroG77188
I
0.437
YQE_11555
Dendroctonus ponderosae
YQE_11555
I
0.435
DAPPUDRAFT_313324
Daphnia pulex
DAPPUDRAFT_313324
I
0.432
ENSGALG00000003723
Gallus gallus
ENSGALG00000003723
I
0.432
ENSMGAG00000004987
Meleagris gallopavo
ENSMGAG00000004987
I
0.432
ENSPPYG00000007929
Pongo abelii
ENSPPYG00000007929
I
0.432
Aan_R010657
Calypte anna
Aan_R010657
I
0.432
Afo_R012027
Aptenodytes forsteri
Afo_R012027
I
0.432
Tal_R002362
Tyto alba
Tal_R002362
I
0.432
LCUP009387
Lucilia cuprina
LCUP009387
I
0.430
MDOA004531
Musca domestica
MDOA004531
I
0.430
ISCW007308
Ixodes scapularis
ISCW007308
I
0.429
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.429
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.429
SMU15002098
Schmidtea mediterranea
SMU15002098
I
0.429
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.429
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.429
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.429
WUBG_04884
Wuchereria bancrofti
WUBG_04884
I
0.426
AAEL004381
Aedes aegypti
AAEL004381
I
0.426
AGAP003896
Anopheles gambiae
AGAP003896
I
0.426
AGAP003897
Anopheles gambiae
AGAP003897
I
0.426
Bm5934
Brugia malayi
Bm5934
I
0.426
ENSAMXG00000014362
Astyanax mexicanus
ENSAMXG00000014362
I
0.426
cica
Danio rerio
ENSDARG00000071150
I
0.426
ENSONIG00000004979
Oreochromis niloticus
ENSONIG00000004979
I
0.426
LOAG_17202
Loa loa
LOAG_17202
I
0.426
WBGene00241539
Onchocerca volvulus
WBGene00241539
I
0.426
YQE_03282
Dendroctonus ponderosae
YQE_03282
I
0.426
AARA009897
Anopheles arabiensis
AARA009897
I
0.426
ACHR004909
Anopheles christyi
ACHR004909
I
0.426
ACOM034716
Anopheles coluzzii
ACOM034716
I
0.426
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
0.426
ASIM_0000334601
Anisakis simplex
ASIM_0000334601
I
0.426
ASU_10300
Ascaris suum
ASU_10300
I
0.426
EVEC_0000011601
Enterobius vermicularis
EVEC_0000011601
I
0.426
L892_g3879
Steinernema scapterisci
L892_g3879
I
0.426
nAv.1.0.1.g00032
Acanthocheilonema viteae
nAv.1.0.1.g00032
I
0.426
nDi.2.2.2.g01012
Dirofilaria immitis
nDi.2.2.2.g01012
I
0.426
nLs.2.1.2.g07996
Litomosoides sigmodontis
nLs.2.1.2.g07996
I
0.426
nOo.2.0.1.g00287
Onchocerca ochengi
nOo.2.0.1.g00287
I
0.426
OFLC_0001331401
Onchocerca flexuosa
OFLC_0001331401
I
0.426
SMUV_0001072601
Syphacia muris
SMUV_0001072601
I
0.426
TCLT_0000608401
Thelazia callipaeda
TCLT_0000608401
I
0.426
GF17645
Drosophila ananassae
FBgn0094663
I
0.424
GG23823
Drosophila erecta
FBgn0115962
I
0.424
GI22721
Drosophila mojavensis
FBgn0145448
I
0.424
GL12097
Drosophila persimilis
FBgn0149705
I
0.424
GM23104
Drosophila sechellia
FBgn0177972
I
0.424
GD19345
Drosophila simulans
FBgn0190847
I
0.424
GJ23448
Drosophila virilis
FBgn0210547
I
0.424
GK10919
Drosophila willistoni
FBgn0212930
I
0.424
GE25659
Drosophila yakuba
FBgn0242721
I
0.424
cic
Drosophila melanogaster
FBgn0262582
D
0.424
GA30228
Drosophila pseudoobscura
FBgn0263363
I
0.424
ENSAMXG00000025656
Astyanax mexicanus
ENSAMXG00000025656
I
0.423
SMAR002457
Strigamia maritima
SMAR002457
I
0.423
csin105999
Clonorchis sinensis
csin105999
I
0.423
ECPE_0001539401
Echinostoma caproni
ECPE_0001539401
I
0.423
T265_06704
Opisthorchis viverrini
T265_06704
I
0.423
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.422
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.422
Moror_4724
Moniliophthora roreri
Moror_4724
I
0.421
GH23608
Drosophila grimshawi
FBgn0131065
I
0.420
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.420
CH063_08155
Colletotrichum higginsianum
CH063_08155
I
0.419
SOX21
Anolis carolinensis
ENSACAG00000002492
I
0.419
sox21
Oryzias latipes
ENSORLG00000017755
I
0.419
ISCW006248
Ixodes scapularis
ISCW006248
I
0.419
KGM_14720
Danaus plexippus
KGM_14720
I
0.419
ML040423a
Mnemiopsis leidyi
ML040423a
I
0.419
CpipJ_CPIJ012202
Culex pipiens
CpipJ_CPIJ012202
I
0.418
ACEP18843
Atta cephalotes
ACEP18843
I
0.418
ACYPI004663
Acyrthosiphon pisum
ACYPI004663
I
0.418
ADAC008993
Anopheles darlingi
ADAC008993
I
0.418
AGAP013411
Anopheles gambiae
AGAP013411
I
0.418
BGIBMGA010263
Bombyx mori
BGIBMGA010263
I
0.418
CapteG39126
Capitella teleta
CapteG39126
I
0.418
CBN17413
Caenorhabditis brenneri
CBN17413
I
0.418
CGI_10015746
Crassostrea gigas
CGI_10015746
I
0.418
CJA07419
Caenorhabditis japonica
CJA07419
I
0.418
CPIJ012202
Culex quinquefasciatus
CPIJ012202
I
0.418
CRE24068
Caenorhabditis remanei
CRE24068
I
0.418
ENSAMXG00000018358
Astyanax mexicanus
ENSAMXG00000018358
I
0.418
ENSBTAG00000019785
Bos taurus
ENSBTAG00000019785
I
0.418
CIC
Canis familiaris
ENSCAFG00000004858
I
0.418
ENSCING00000007655
Ciona intestinalis
ENSCING00000007655
I
0.418
CIC
Callithrix jacchus
ENSCJAG00000012847
I
0.418
ENSCPOG00000004391
Cavia porcellus
ENSCPOG00000004391
I
0.418
CIC
Dasypus novemcinctus
ENSDNOG00000047657
I
0.418
Cic
Dipodomys ordii
ENSDORG00000008822
I
0.418
CIC
Equus caballus
ENSECAG00000011342
I
0.418
CIC
Echinops telfairi
ENSETEG00000017271
I
0.418
ENSFCAG00000012737
Felis catus
ENSFCAG00000012737
I
0.418
CIC
Homo sapiens
ENSG00000079432
I
0.418
cicb
Gasterosteus aculeatus
ENSGACG00000009452
I
0.418
CIC
Gorilla gorilla
ENSGGOG00000000192
I
0.418
ENSGMOG00000005167
Gadus morhua
ENSGMOG00000005167
I
0.418
ENSLACG00000002764
Latimeria chalumnae
ENSLACG00000002764
I
0.418
ENSMEUG00000016625
Macropus eugenii
ENSMEUG00000016625
I
0.418
ENSMICG00000015176
Microcebus murinus
ENSMICG00000015176
I
0.418
ENSMLUG00000016650
Myotis lucifugus
ENSMLUG00000016650
I
0.418
ENSMMUG00000012174
Macaca mulatta
ENSMMUG00000012174
I
0.418
ENSMPUG00000007557
Mustela putorius furo
ENSMPUG00000007557
I
0.418
Cic
Mus musculus
ENSMUSG00000005442
D
0.418
ENSNLEG00000010614
Nomascus leucogenys
ENSNLEG00000010614
I
0.418
ENSOARG00000007985
Ovis aries
ENSOARG00000007985
I
0.418
ENSOCUG00000006458
Oryctolagus cuniculus
ENSOCUG00000006458
I
0.418
CIC
Otolemur garnettii
ENSOGAG00000003964
I
0.418
ENSONIG00000013108
Oreochromis niloticus
ENSONIG00000013108
I
0.418
cica
Oryzias latipes
ENSORLG00000007091
I
0.418
cicb
Oryzias latipes
ENSORLG00000013259
I
0.418
ENSPANG00000009039
Papio anubis
ENSPANG00000009039
I
0.418
CIC
Procavia capensis
ENSPCAG00000017001
I
0.418
ENSPFOG00000000116
Poecilia formosa
ENSPFOG00000000116
I
0.418
ENSPFOG00000016231
Poecilia formosa
ENSPFOG00000016231
I
0.418
ENSPPYG00000010041
Pongo abelii
ENSPPYG00000010041
I
0.418
CIC
Pan troglodytes
ENSPTRG00000011051
I
0.418
CIC
Pteropus vampyrus
ENSPVAG00000016806
I
0.418
Cic
Rattus norvegicus
ENSRNOG00000056118
I
0.418
CIC
Sus scrofa
ENSSSCG00000003030
I
0.418
ENSSTOG00000000852
Ictidomys tridecemlineatus
ENSSTOG00000000852
I
0.418
CIC
Tupaia belangeri
ENSTBEG00000009044
I
0.418
CIC
Tetraodon nigroviridis
ENSTNIG00000003521
I
0.418
CIC
Takifugu rubripes
ENSTRUG00000007193
I
0.418
CIC
Tursiops truncatus
ENSTTRG00000013873
I
0.418
GB43462
Apis mellifera
GB43462
I
0.418
KGM_16941
Danaus plexippus
KGM_16941
I
0.418
L798_09303
Zootermopsis nevadensis
L798_09303
I
0.418
MCINX015089
Melitaea cinxia
MCINX015089
I
0.418
NV10910
Nasonia vitripennis
NV10910
I
0.418
PHUM079880
Pediculus humanus
PHUM079880
I
0.418
RPRC001090
Rhodnius prolixus
RPRC001090
I
0.418
SMAR009315
Strigamia maritima
SMAR009315
I
0.418
SPU_025292
Strongylocentrotus purpuratus
SPU_025292
I
0.418
TC004697
Tribolium castaneum
TC004697
I
0.418
tetur21g00740
Tetranychus urticae
tetur21g00740
I
0.418
gei-3
Caenorhabditis elegans
WBGene00001560
D
0.418
Alligator_sinensis_CCG005631.1
Alligator sinensis
Alligator_sinensis_CCG005631.1
I
0.418
Cflo_01544--XP_624175.2_APIME
Camponotus floridanus
Cflo_01544--XP_624175.2_APIME
I
0.418
Cmyd_10001800
Chelonia mydas
Cmyd_10001800
I
0.418
ENSP00000160740-D1
Bos grunniens
ENSP00000160740-D1
I
0.418
ENSP00000160740
Macaca fascicularis
ENSP00000160740
I
0.418
Myotis_brandtii_Cic_10007129
Myotis brandtii
Myotis_brandtii_Cic_10007129
I
0.418
Ogr10275
Ophisaurus gracilis
Ogr10275
I
0.418
Pvit_02876
Pogona vitticeps
Pvit_02876
I
0.418
gw.448.64.1
Branchiostoma floridae
gw.448.64.1
I
0.418
gw.46.292.1
Branchiostoma floridae
gw.46.292.1
I
0.418
Ocbimv22037932m.g
Octopus bimaculoides
Ocbimv22037932m.g
I
0.418
Sakowv30042695m.g
Saccoglossus kowalevskii
Sakowv30042695m.g
I
0.418
CLEC003268
Cimex lectularius
CLEC003268
I
0.418
HHAL000065-PA
Halyomorpha halys
HHAL000065-PA
I
0.418
SNAPOd2T00000335001
Oikopleura dioica
SNAPOd2T00000335001
I
0.418
cic
Xenopus tropicalis
XB-GENE-6467430
I
0.418
AALB003439
Anopheles albimanus
AALB003439
I
0.418
AARA001217
Anopheles arabiensis
AARA001217
I
0.418
ACHR006446
Anopheles christyi
ACHR006446
I
0.418
ACUA015009
Anopheles culicifacies
ACUA015009
I
0.418
ADIR003322
Anopheles dirus
ADIR003322
I
0.418
AEPI005675
Anopheles epiroticus
AEPI005675
I
0.418
AFAF009600
Anopheles farauti
AFAF009600
I
0.418
AFUN006011
Anopheles funestus
AFUN006011
I
0.418
AMAM017484
Anopheles maculatus
AMAM017484
I
0.418
AMEC010127
Anopheles melas
AMEC010127
I
0.418
AMEM005678
Anopheles merus
AMEM005678
I
0.418
AMIN003810
Anopheles minimus
AMIN003810
I
0.418
AQUA008168
Anopheles quadriannulatus
AQUA008168
I
0.418
ASTEI00261
Anopheles stephensi
ASTEI00261
I
0.418
LLOJ007756
Lutzomyia longipalpis
LLOJ007756
I
0.418
ANCCAN_00149
Ancylostoma caninum
ANCCAN_00149
I
0.418
ANCCEY_04123
Ancylostoma ceylanicum
ANCCEY_04123
I
0.418
ANCDUO_05529
Ancylostoma duodenale
ANCDUO_05529
I
0.418
D917_02434
Trichinella nativa
D917_02434
I
0.418
D918_06270
Trichuris suis
D918_06270
I
0.418
Hba_18941
Heterorhabditis bacteriophora
Hba_18941
I
0.418
L596_g5739
Steinernema carpocapsae
L596_g5739
I
0.418
L889_g11174
Steinernema feltiae
L889_g11174
I
0.418
L893_g26751
Steinernema glaseri
L893_g26751
I
0.418
L898_g8837
Steinernema monticolum
L898_g8837
I
0.418
OESDEN_00065
Oesophagostomum dentatum
OESDEN_00065
I
0.418
SVUK_0000932601
Strongylus vulgaris
SVUK_0000932601
I
0.418
TMUE_s0223001200
Trichuris muris
TMUE_s0223001200
I
0.418
TTRE_0000098801
Trichuris trichiura
TTRE_0000098801
I
0.418
NV11920
Nasonia vitripennis
NV11920
I
0.417
CIMG_12783
Coccidioides immitis
CIMG_12783
I
0.416
BDDG_02246
Blastomyces dermatitidis
BDDG_02246
I
0.416
CBG12840
Caenorhabditis briggsae
CBG12840
I
0.416
CPC735_049570
Coccidioides posadasii
CPC735_049570
I
0.416
HCBG_03464
Histoplasma capsulatum
HCBG_03464
I
0.416
HCBG_03514
Histoplasma capsulatum
HCBG_03514
I
0.416
NechaG106035
Fusarium solani
NechaG106035
I
0.416
fgeneshN1_pm.sca_3_chr4_2_0000013
Nectria haematococca
fgeneshN1_pm.sca_3_chr4_2_0000013
I
0.416
scaffold4-EXSNAP2012.129
Pristionchus exspectatus
scaffold4-EXSNAP2012.129
I
0.416
D915_09544
Fasciola hepatica
D915_09544
I
0.415