CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPU_027981
(
Strongylocentrotus purpuratus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SPU_027981
T332759_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_027981-tr
Sox
11
81
PRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKSMRDKVRYDREMQSYK
SPU_027981-tr
Sox
126
155
VALEEKGKGVFHEKSMRDKVRYDREMQSYK
SPU_027981-tr
Sox
174
242
PKRNLSAFFIFSGENRAAIKSVHPNWSVGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYK
Links
Other
Sox
family TFs
Other
Strongylocentrotus purpuratus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC007692
Tribolium castaneum
TC007692
N
0.495
A_07022
Schistosoma haematobium
A_07022
N
0.458
HDID_0000439701
Hymenolepis diminuta
HDID_0000439701
N
0.422
ENSOCUG00000022718
Oryctolagus cuniculus
ENSOCUG00000022718
N
0.420
ENSOCUG00000022728
Oryctolagus cuniculus
ENSOCUG00000022728
N
0.420
ENSOCUG00000024061
Oryctolagus cuniculus
ENSOCUG00000024061
N
0.420