CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDID_0000439701
(
Hymenolepis diminuta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HDID_0000439701
T336419_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HDID_0000439701-mRNA-1
Sox
8
51
PKRALTPYAVFVQSMRDEHKKKNPNTSVDFATFSKECSAKWKVG
HDID_0000439701-mRNA-1
Sox
56
90
FRAFFQTLSAKEKKKFEDLAAKDKERYQKDMKNYK
HDID_0000439701-mRNA-1
Sox
107
173
PKKPMSAFFLFCQDERAKVREAHPDWSVGQCAKELASRWEQCKNKSKYETQATQEKAKYQKAMEKYN
Links
Other
Sox
family TFs
Other
Hymenolepis diminuta
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC007692
Tribolium castaneum
TC007692
N
0.511
A_07022
Schistosoma haematobium
A_07022
N
0.472
ENSOCUG00000022718
Oryctolagus cuniculus
ENSOCUG00000022718
N
0.455
ENSOCUG00000024061
Oryctolagus cuniculus
ENSOCUG00000024061
N
0.455
ENSOCUG00000022728
Oryctolagus cuniculus
ENSOCUG00000022728
N
0.445
TASK_0000901701
Taenia asiatica
TASK_0000901701
N
0.434
SPU_027981
Strongylocentrotus purpuratus
SPU_027981
N
0.422