CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_1000979
(
Mycosphaerella graminicola
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgenesh1_pg.C_chr_1000979
T334092_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_1000979
Sox
165
209
RLKNFTKRVTAVAAEWKSLNAAEREKYQHLYAQDLARYQAEYEVT
Links
Other
Sox
family TFs
Other
Mycosphaerella graminicola
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Mycgr3G89562
Zymoseptoria tritici
Mycgr3G89562
N
0.741
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.443
gw1.88.46.1
Fragilariopsis cylindrus
gw1.88.46.1
N
0.440
CC1G_07924
Coprinopsis cinerea
CC1G_07924
N
0.438
PV06_10806
Exophiala oligosperma
PV06_10806
N
0.422
NechaG59892
Fusarium solani
NechaG59892
N
0.419
estExt_Genewise1.C_sca_3_chr4_2_00418
Nectria haematococca
estExt_Genewise1.C_sca_3_chr4_2_00418
N
0.419
GPLIN_000530400
Globodera pallida
GPLIN_000530400
N
0.418
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.416
CaO19.1731
Candida albicans
CaO19.1731
N
0.416
CaO19.9299
Candida albicans
CaO19.9299
N
0.416
POSPLDRAFT_103238
Postia placenta
POSPLDRAFT_103238
N
0.415