CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC005234
(
Leptinotarsa decemlineata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LDEC005234
T334886_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC005234-PA
Sox
53
121
PRVPLTGYVRYLNDRREVVRATNPNLSFAEITKMLASEWSTLPADKKQQYLDAAEQDRERYTREYNAYK
Links
Other
Sox
family TFs
Other
Leptinotarsa decemlineata
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC009230
Tribolium castaneum
TC009230
N
0.672
YQE_04289
Dendroctonus ponderosae
YQE_04289
N
0.626
GB41600
Apis mellifera
GB41600
I
0.592
NV11068
Nasonia vitripennis
NV11068
I
0.572
Hsal_13222--XP_625193.1_APIME
Harpegnathos saltator
Hsal_13222--XP_625193.1_APIME
I
0.549
L798_15457
Zootermopsis nevadensis
L798_15457
I
0.541
HHAL010521-PA
Halyomorpha halys
HHAL010521-PA
I
0.539
CLEC002862
Cimex lectularius
CLEC002862
I
0.536
CpipJ_CPIJ004396
Culex pipiens
CpipJ_CPIJ004396
N
0.524
CPIJ004396
Culex quinquefasciatus
CPIJ004396
N
0.524
AFAF015452
Anopheles farauti
AFAF015452
N
0.499
AFUN010952
Anopheles funestus
AFUN010952
N
0.497
RPRC008043
Rhodnius prolixus
RPRC008043
I
0.491
SPU_004776
Strongylocentrotus purpuratus
SPU_004776
I
0.489
SPU_018371
Strongylocentrotus purpuratus
SPU_018371
I
0.489
SMAR002604
Strigamia maritima
SMAR002604
I
0.487
KGM_20768
Danaus plexippus
KGM_20768
N
0.486
AAEL005309
Aedes aegypti
AAEL005309
N
0.483
AAEL013914
Aedes aegypti
AAEL013914
N
0.483
TriadG23407
Trichoplax adhaerens
TriadG23407
I
0.481
ADIR009189
Anopheles dirus
ADIR009189
N
0.480
Cflo_07151--XP_625193.1_APIME
Camponotus floridanus
Cflo_07151--XP_625193.1_APIME
N
0.478
ADAC004351
Anopheles darlingi
ADAC004351
N
0.476
AALB007513
Anopheles albimanus
AALB007513
N
0.476
Ocbimv22031259m.g
Octopus bimaculoides
Ocbimv22031259m.g
I
0.475
ACEP22292
Atta cephalotes
ACEP22292
N
0.471
SINV20852
Solenopsis invicta
SINV20852
N
0.471
CapteG155070
Capitella teleta
CapteG155070
I
0.470
LotgiG196090
Lottia gigantea
LotgiG196090
I
0.469
ACUA004787
Anopheles culicifacies
ACUA004787
N
0.467
AMIN008132
Anopheles minimus
AMIN008132
N
0.467
ASTEI08088
Anopheles stephensi
ASTEI08088
N
0.467
MCINX003064
Melitaea cinxia
MCINX003064
I
0.458
ACYPI002322
Acyrthosiphon pisum
ACYPI002322
I
0.456
Sakowv30033800m.g
Saccoglossus kowalevskii
Sakowv30033800m.g
I
0.455
AATE005479
Anopheles atroparvus
AATE005479
N
0.448
ACHR006951
Anopheles christyi
ACHR006951
N
0.448
AEPI008671
Anopheles epiroticus
AEPI008671
N
0.448
BGIBMGA005325
Bombyx mori
BGIBMGA005325
I
0.446
ENSAMXG00000013048
Astyanax mexicanus
ENSAMXG00000013048
I
0.446
hmg20a
Gasterosteus aculeatus
ENSGACG00000003466
I
0.446
ENSGMOG00000015452
Gadus morhua
ENSGMOG00000015452
I
0.446
ENSONIG00000012862
Oreochromis niloticus
ENSONIG00000012862
I
0.446
hmg20a
Oryzias latipes
ENSORLG00000001794
I
0.446
ENSPFOG00000014087
Poecilia formosa
ENSPFOG00000014087
I
0.446
hmg20a
Tetraodon nigroviridis
ENSTNIG00000008460
I
0.446
hmg20a
Takifugu rubripes
ENSTRUG00000016127
I
0.446
ENSXMAG00000000587
Xiphophorus maculatus
ENSXMAG00000000587
I
0.446
HMEL017569
Heliconius melpomene
HMEL017569
I
0.446
AGAP004789
Anopheles gambiae
AGAP004789
N
0.441
AGAP004791
Anopheles gambiae
AGAP004791
N
0.441
estExt_fgenesh2_pg.C_2300011
Branchiostoma floridae
estExt_fgenesh2_pg.C_2300011
I
0.441
estExt_fgenesh2_pg.C_2300014
Branchiostoma floridae
estExt_fgenesh2_pg.C_2300014
I
0.441
AARA006038
Anopheles arabiensis
AARA006038
N
0.441
ACOM038391
Anopheles coluzzii
ACOM038391
N
0.441
AQUA002593
Anopheles quadriannulatus
AQUA002593
N
0.441
XP_002158984.1
Hydra magnipapillata
XP_002158984.1
I
0.438
XP_002161760.1
Hydra magnipapillata
XP_002161760.1
I
0.438
MDOA010382
Musca domestica
MDOA010382
N
0.436
NEMVEDRAFT_v1g105457
Nematostella vectensis
NEMVEDRAFT_v1g105457
I
0.433
ACYPI001201
Acyrthosiphon pisum
ACYPI001201
N
0.426
ACYPI34316
Acyrthosiphon pisum
ACYPI34316
N
0.421
ENSLOCG00000014255
Lepisosteus oculatus
ENSLOCG00000014255
I
0.417
TC011144
Tribolium castaneum
TC011144
N
0.416