CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000647500
(
Parastrongyloides trichosuri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PTRK_0000647500
T336822_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000647500.1
Sox
31
99
PEKPIVPELRYKKKYFPLLRNENPSLPVWEISDILSKKWEEIDDGERMIYYQEYEREKNEYDKQMKSYY
Links
Other
Sox
family TFs
Other
Parastrongyloides trichosuri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001040000
Strongyloides papillosus
SPAL_0001040000
N
0.588
SVE_0548500
Strongyloides venezuelensis
SVE_0548500
N
0.588
SNAPOd2T00010760001
Oikopleura dioica
SNAPOd2T00010760001
N
0.442
SSTP_0000720500
Strongyloides stercoralis
SSTP_0000720500
N
0.421
RSKR_0000347900
Rhabditophanes kr3021
RSKR_0000347900
N
0.419