CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPAL_0001040000
(
Strongyloides papillosus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SPAL_0001040000
T336986_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0001040000.1
Sox
30
98
PEKPISPELRFKKKNFTIMRSENPNIPVWEISDLLTKKWEEADDTEKMVYYQEYEREKMEYEKQMKNYY
Links
Other
Sox
family TFs
Other
Strongyloides papillosus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVE_0548500
Strongyloides venezuelensis
SVE_0548500
N
0.741
PTRK_0000647500
Parastrongyloides trichosuri
PTRK_0000647500
N
0.588
SSTP_0000720500
Strongyloides stercoralis
SSTP_0000720500
N
0.499
L889_g3706
Steinernema feltiae
L889_g3706
N
0.438