CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0001177801
(
Protopolystoma xenopodis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PXEA_0001177801
T336839_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0001177801-mRNA-1
Sox
9
76
PAKALSSFNFFVKHKSNQNVSYGFLTFAERNKKLGIEWGSLPESDKLPFIKLAMDDRLRYKKEMEVYK
Links
Other
Sox
family TFs
Other
Protopolystoma xenopodis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_002_00505
Aquilegia coerulea
Aquca_002_00505
I
0.422
29822.m003476
Ricinus communis
29822.m003476
I
0.415
cassava42041.valid.m1
Manihot esculenta
cassava42041.valid.m1
I
0.415