CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gfo_R012777
(
Geospiza fortis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Gfo_R012777
T341093_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R012777
T-box
54
104
VTLEAKELWDQFHKLGTEMVITKSGRHLAGKEKKKVCSFCNVAPRHKFAMA
Gfo_R012777
T-box
126
205
PDTHPEPFNIIFFFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD
Links
Other
T-box
family TFs
Other
Geospiza fortis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCINX014390
Melitaea cinxia
MCINX014390
N
0.816
Cmyd_10004964
Chelonia mydas
Cmyd_10004964
N
0.765
ENSSHAG00000010802
Sarcophilus harrisii
ENSSHAG00000010802
N
0.764
MhA1_Contig121.frz3.gene76
Meloidogyne hapla
MhA1_Contig121.frz3.gene76
N
0.761
GI21789
Drosophila mojavensis
FBgn0144519
N
0.745
Aan_R010141
Calypte anna
Aan_R010141
N
0.744
ENSBTAP00000024865-D1
Bos grunniens
ENSBTAP00000024865-D1
N
0.740
PPAI002080
Phlebotomus papatasi
PPAI002080
N
0.740