CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MhA1_Contig121.frz3.gene76
(
Meloidogyne hapla
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
MhA1_Contig121.frz3.gene76
T341813_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig121.frz3.gene76
T-box
53
100
IRLEGAQLWRRFNSLGTEMIVTRNGRRMLPTLQCSLYGLEPNQRSFVS
MhA1_Contig121.frz3.gene76
T-box
94
190
NQRSFVSKAIVNSMHRYQPRFHLVVHVDQNKIDKEASALNRRKTFVFQETAFMSVTAYQNHRVGGSELMRTINIFNYLIQITELKIESNPFAKGFRD
Links
Other
T-box
family TFs
Other
Meloidogyne hapla
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10004964
Chelonia mydas
Cmyd_10004964
N
0.813
MCINX014390
Melitaea cinxia
MCINX014390
N
0.779
Gfo_R012777
Geospiza fortis
Gfo_R012777
N
0.761
ENSSHAG00000010802
Sarcophilus harrisii
ENSSHAG00000010802
N
0.750
PPAI002080
Phlebotomus papatasi
PPAI002080
N
0.744