CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig350.frz3.gene2
(
Meloidogyne hapla
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
MhA1_Contig350.frz3.gene2
T343550_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig350.frz3.gene2
TBP
96
178
KPILQNIVSTVNLDVRLDLNQIAKTALNSEYNPKRFSAVIMRIRDPRSTALIFNNGKIVCTGTKSEESSRLAARRFARIIQRL
MhA1_Contig350.frz3.gene2
TBP
186
265
EFKVQNLVASCDCKFRLQLEGFAITHYQFSTYEPELFPGLIYRMVKPRVVLLIFLSGKVVITGARKREHIDDAFSQASPH
Links
Other
TBP
family TFs
Other
Meloidogyne hapla
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc02372
Meloidogyne incognita
Minc02372
I
0.957
maker-nMf.1.1.scaf06410-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06410-snap-gene-0.8
I
0.957
Minc14167
Meloidogyne incognita
Minc14167
I
0.804
PPA00840
Pristionchus pacificus
PPA00840
I
0.755
OFLC_0000347601
Onchocerca flexuosa
OFLC_0000347601
I
0.755
ANCCAN_21534
Ancylostoma caninum
ANCCAN_21534
I
0.748
DME_0000305201
Dracunculus medinensis
DME_0000305201
I
0.748
L898_g32593
Steinernema monticolum
L898_g32593
I
0.748
CBG09138
Caenorhabditis briggsae
CBG09138
I
0.742
CJA15284
Caenorhabditis japonica
CJA15284
I
0.742
CRE07760
Caenorhabditis remanei
CRE07760
I
0.742
scaffold547-EXSNAP2012.2
Pristionchus exspectatus
scaffold547-EXSNAP2012.2
I
0.737
L889_g25192
Steinernema feltiae
L889_g25192
I
0.736
SVUK_0000188301
Strongylus vulgaris
SVUK_0000188301
I
0.735
Bm5856
Brugia malayi
Bm5856
I
0.731
ENSOANG00000022637
Ornithorhynchus anatinus
ENSOANG00000022637
I
0.731
LOAG_01904
Loa loa
LOAG_01904
I
0.731
WBGene00245666
Onchocerca volvulus
WBGene00245666
I
0.731
ACAC_0000032501
Angiostrongylus cantonensis
ACAC_0000032501
I
0.731
ACOC_0000950001
Angiostrongylus costaricensis
ACOC_0000950001
I
0.731
BTMF_0000332301
Brugia timori
BTMF_0000332301
I
0.731
EEL_0000831901
Elaeophora elaphi
EEL_0000831901
I
0.731
nAv.1.0.1.g05339
Acanthocheilonema viteae
nAv.1.0.1.g05339
I
0.731
nDi.2.2.2.g01504
Dirofilaria immitis
nDi.2.2.2.g01504
I
0.731
nLs.2.1.2.g02336
Litomosoides sigmodontis
nLs.2.1.2.g02336
I
0.731
nOo.2.0.1.g04267
Onchocerca ochengi
nOo.2.0.1.g04267
I
0.731
TCLT_0000047501
Thelazia callipaeda
TCLT_0000047501
I
0.731
TCNE_0001669001
Toxocara canis
TCNE_0001669001
I
0.731
L596_g25394
Steinernema carpocapsae
L596_g25394
I
0.730
CBN01059
Caenorhabditis brenneri
CBN01059
I
0.725
ANCCAN_09966
Ancylostoma caninum
ANCCAN_09966
I
0.725
ANCCEY_07137
Ancylostoma ceylanicum
ANCCEY_07137
I
0.725
ANCDUO_27670
Ancylostoma duodenale
ANCDUO_27670
I
0.725
DICVIV_03239
Dictyocaulus viviparus
DICVIV_03239
I
0.725
HCOI00585200
Haemonchus contortus
HCOI00585200
I
0.725
HCOI02047500
Haemonchus contortus
HCOI02047500
I
0.725
NECAME_03068
Necator americanus
NECAME_03068
I
0.725
OESDEN_06921
Oesophagostomum dentatum
OESDEN_06921
I
0.725
tbp-1
Caenorhabditis elegans
WBGene00006542
I
0.719
BXY_1660200
Bursaphelenchus xylophilus
BXY_1660200
I
0.719
EVEC_0000621801
Enterobius vermicularis
EVEC_0000621801
I
0.719
SMUV_0000093601
Syphacia muris
SMUV_0000093601
I
0.719
RSKR_0000436900
Rhabditophanes kr3021
RSKR_0000436900
I
0.718
PTRK_0001233700
Parastrongyloides trichosuri
PTRK_0001233700
I
0.717
SPAL_0001018500
Strongyloides papillosus
SPAL_0001018500
I
0.717
SSTP_0000124500
Strongyloides stercoralis
SSTP_0000124500
I
0.717
SVE_0506100
Strongyloides venezuelensis
SVE_0506100
I
0.717
TELCIR_11261
Teladorsagia circumcincta
TELCIR_11261
I
0.716
BGLB001531
Biomphalaria glabrata
BGLB001531
I
0.714
L892_g16529
Steinernema scapterisci
L892_g16529
I
0.713
EFV53163
Trichinella spiralis
EFV53163
I
0.712
ENSFALG00000003735
Ficedula albicollis
ENSFALG00000003735
I
0.712
D917_07868
Trichinella nativa
D917_07868
I
0.712
L893_g19284
Steinernema glaseri
L893_g19284
I
0.712
WUBG_07006
Wuchereria bancrofti
WUBG_07006
I
0.707
JAAARDRAFT_628099
Jaapia argillacea
JAAARDRAFT_628099
I
0.707
nRc.2.0.1.g22836
Romanomermis culicivorax
nRc.2.0.1.g22836
I
0.707
D918_02710
Trichuris suis
D918_02710
I
0.701
TMUE_s0157001700
Trichuris muris
TMUE_s0157001700
I
0.701
TTRE_0000685401
Trichuris trichiura
TTRE_0000685401
I
0.701