CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA009051
(
Oryza indica
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
BGIOSGA009051
T343705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA009051-PA
TCP
27
80
VADEPGGVRARRTSTTRLSVPTSIAFYDIQNRLGVNRPSKSIEWLICAALVARL
Links
Other
TCP
family TFs
Other
Oryza indica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA06G04550
Oryza nivara
ONIVA06G04550
N
0.971
ORGLA02G0280100
Oryza glaberrima
ORGLA02G0280100
N
0.954
SELMODRAFT_28794
Selaginella moellendorffii
SELMODRAFT_28794
I
0.901
SELMODRAFT_7330
Selaginella moellendorffii
SELMODRAFT_7330
I
0.891
OBART02G32460
Oryza barthii
OBART02G32460
I
0.889
MDP0000388684
Malus domestica
MDP0000388684
I
0.871
OBART05G22490
Oryza barthii
OBART05G22490
I
0.869
MDP0000130524
Malus domestica
MDP0000130524
I
0.850
MDP0000199422
Malus domestica
MDP0000199422
I
0.850
MDP0000202241
Malus domestica
MDP0000202241
I
0.850
MDP0000253526
Malus domestica
MDP0000253526
I
0.850
MDP0000373350
Malus domestica
MDP0000373350
I
0.850
MDP0000617746
Malus domestica
MDP0000617746
I
0.850
e_gw1.207.98.1
Physcomitrella patens
e_gw1.207.98.1
I
0.842