CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC02G03720
(
Oryza punctata
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
OPUNC02G03720
T350535_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC02G03720.1
Whirly
141
276
VFKGKAALSMHPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTA
OPUNC02G03720.2
Whirly
103
238
VFKGKAALSMHPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTA
OPUNC02G03720.3
Whirly
128
263
VFKGKAALSMHPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTA
Links
Other
Whirly
family TFs
Other
Oryza punctata
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_017077
Oryza longistaminata
OLONG_017077
N
1.000
BGIOSGA007096
Oryza indica
BGIOSGA007096
N
0.993
OBART02G04450
Oryza barthii
OBART02G04450
N
0.993
OGLUM02G04370
Oryza glumaepatula
OGLUM02G04370
N
0.993
ONIVA02G04450
Oryza nivara
ONIVA02G04450
N
0.993
ORGLA02G0041200
Oryza glaberrima
ORGLA02G0041200
N
0.993
ORUFI02G04590
Oryza rufipogon
ORUFI02G04590
N
0.993
OS02G0158400
Oryza sativa
OS02G0158400
N
0.993
MLOC_19666
Hordeum vulgare
MLOC_19666
N
0.983
LPERR02G03890
Leersia perrieri
LPERR02G03890
N
0.978
OB02G13770
Oryza brachyantha
OB02G13770
N
0.949
Pavir.Ab00418
Panicum virgatum
Pavir.Ab00418
N
0.904
Si018290m.g
Setaria italica
Si018290m.g
N
0.882
Traes_6BS_0A692E6F6
Triticum aestivum
Traes_6BS_0A692E6F6
N
0.882
BRADI3G04450
Brachypodium distachyon
BRADI3G04450
N
0.875
Traes_6AS_A92DEAA15
Triticum aestivum
Traes_6AS_A92DEAA15
N
0.868
Traes_6DS_1FC471B7F
Triticum aestivum
Traes_6DS_1FC471B7F
N
0.868
Pavir.Aa03265
Panicum virgatum
Pavir.Aa03265
N
0.868
GRMZM2G012262
Zea mays
GRMZM2G012262
N
0.853
Sb04g004060
Sorghum bicolor
Sb04g004060
N
0.831
F775_24520
Aegilops tauschii
F775_24520
N
0.767
GSMUA_Achr9G08300_001
Musa acuminata
GSMUA_Achr9G08300_001
N
0.764