OLONG_003473 (Oryza longistaminata)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 OLONG_003473 T351037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.750 0.750
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_003473-R1 WRC 97 128

Links

Other WRC family TFs
Other Oryza longistaminata TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM5G893117 Zea mays GRMZM5G893117 I 1.000
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.944
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.850
GRF1 Oryza indica BGIOSGA005497 I 0.781
BRADI3G57267 Brachypodium distachyon BRADI3G57267 I 0.781
F775_24390 Aegilops tauschii F775_24390 I 0.781
GRMZM2G105335 Zea mays GRMZM2G105335 I 0.781
GSMUA_Achr8G30640_001 Musa acuminata GSMUA_Achr8G30640_001 I 0.781
LPERR02G28430 Leersia perrieri LPERR02G28430 I 0.781
OB02G41370 Oryza brachyantha OB02G41370 I 0.781
OBART02G34550 Oryza barthii OBART02G34550 I 0.781
OGLUM02G35690 Oryza glumaepatula OGLUM02G35690 I 0.781
OMERI02G32800 Oryza meridionalis OMERI02G32800 I 0.781
ONIVA02G36590 Oryza nivara ONIVA02G36590 I 0.781
OPUNC02G31900 Oryza punctata OPUNC02G31900 I 0.781
ORGLA02G0298900 Oryza glaberrima ORGLA02G0298900 I 0.781
ORUFI02G36060 Oryza rufipogon ORUFI02G36060 I 0.781
GRF1 Oryza sativa OS02G0776900 I 0.781
POPTR_0006s14560 Populus trichocarpa POPTR_0006s14560 I 0.781
Sb04g034800 Sorghum bicolor Sb04g034800 I 0.781
Si017511m.g Setaria italica Si017511m.g I 0.781
Traes_6AL_F5BFFCA3E Triticum aestivum Traes_6AL_F5BFFCA3E I 0.781
Traes_6DL_4C3F04219 Triticum aestivum Traes_6DL_4C3F04219 I 0.781
mgf020920m Mimulus guttatus mgf020920m I 0.781
Eucgr.F04420 Eucalyptus grandis Eucgr.F04420 I 0.781
evm.TU.supercontig_25.118 Carica papaya evm.TU.supercontig_25.118 I 0.781
Pavir.J14128 Panicum virgatum Pavir.J14128 I 0.781
SapurV1A.0177s0310 Salix purpurea SapurV1A.0177s0310 I 0.781
SapurV1A.0616s0110 Salix purpurea SapurV1A.0616s0110 I 0.781
GRF5 Arabidopsis thaliana AT3G13960 I 0.750
AtGRF5 Arabidopsis lyrata fgenesh2_kg.3__1504__AT3G13960.1 I 0.750
PGSC0003DMG400030881 Solanum tuberosum PGSC0003DMG400030881 I 0.750
POPTR_0013s07500 Populus trichocarpa POPTR_0013s07500 I 0.750
PRUPE_ppa022199mg Prunus persica PRUPE_ppa022199mg I 0.750
Solyc08g075950.1 Solanum lycopersicum Solyc08g075950.1 I 0.750
TCM_025561 Theobroma cacao TCM_025561 I 0.750
VIT_16s0039g01450 Vitis vinifera VIT_16s0039g01450 I 0.750
Cla006913 Citrullus lanatus Cla006913 I 0.750
Pm019573 Prunus mume Pm019573 I 0.750
30073.m002312 Ricinus communis 30073.m002312 I 0.750
cassava14256.m1 Manihot esculenta cassava14256.m1 I 0.750
cassava41970.valid.m1 Manihot esculenta cassava41970.valid.m1 I 0.750
Cucsa.017410 Cucumis sativus Cucsa.017410 I 0.750
Aquca_052_00053 Aquilegia coerulea Aquca_052_00053 I 0.750
Bostr.28625s0309 Boechera stricta Bostr.28625s0309 I 0.750
Cagra.0736s0034 Capsella grandiflora Cagra.0736s0034 I 0.750
Cagra.0757s0005 Capsella grandiflora Cagra.0757s0005 I 0.750
Carubv10013860m.g Capsella rubella Carubv10013860m.g I 0.750
Carubv10015887m.g Capsella rubella Carubv10015887m.g I 0.750
Ciclev10032065m.g Citrus clementina Ciclev10032065m.g I 0.750
gene12549-v1.0-hybrid Fragaria vesca gene12549-v1.0-hybrid I 0.750
Gorai.003G057700 Gossypium raimondii Gorai.003G057700 I 0.750
Gorai.013G184200 Gossypium raimondii Gorai.013G184200 I 0.750
Lus10009533.g Linum usitatissimum Lus10009533.g I 0.750
Lus10020352.g Linum usitatissimum Lus10020352.g I 0.750
orange1.1g020051m.g Citrus sinensis orange1.1g020051m.g I 0.750
SapurV1A.0568s0060 Salix purpurea SapurV1A.0568s0060 I 0.750
Thhalv10020873m.g Eutrema salsugineum Thhalv10020873m.g I 0.750
PK09793.1 Cannabis sativa PK09793.1 I 0.750
BGIOSGA022056 Oryza indica BGIOSGA022056 I 0.719
Bra027384 Brassica rapa Bra027384 I 0.719
BRADI1G50597 Brachypodium distachyon BRADI1G50597 I 0.719
BRADI5G20607 Brachypodium distachyon BRADI5G20607 I 0.719
F775_19681 Aegilops tauschii F775_19681 I 0.719
GRMZM2G098594 Zea mays GRMZM2G098594 I 0.719
GRMZM2G119359 Zea mays GRMZM2G119359 I 0.719
GSMUA_Achr10G06370_001 Musa acuminata GSMUA_Achr10G06370_001 I 0.719
GSMUA_Achr1G23840_001 Musa acuminata GSMUA_Achr1G23840_001 I 0.719
GSMUA_Achr2G04650_001 Musa acuminata GSMUA_Achr2G04650_001 I 0.719
GSMUA_AchrUn_randomG04320_001 Musa acuminata GSMUA_AchrUn_randomG04320_001 I 0.719
LPERR06G01000 Leersia perrieri LPERR06G01000 I 0.719
OB06G11200 Oryza brachyantha OB06G11200 I 0.719
OBART06G01070 Oryza barthii OBART06G01070 I 0.719
OGLUM06G01060 Oryza glumaepatula OGLUM06G01060 I 0.719
OMERI06G01060 Oryza meridionalis OMERI06G01060 I 0.719
ONIVA06G01450 Oryza nivara ONIVA06G01450 I 0.719
OPUNC06G01050 Oryza punctata OPUNC06G01050 I 0.719
ORGLA06G0010200 Oryza glaberrima ORGLA06G0010200 I 0.719
ORUFI06G01080 Oryza rufipogon ORUFI06G01080 I 0.719
PGSC0003DMG400018491 Solanum tuberosum PGSC0003DMG400018491 I 0.719
PGSC0003DMG400029384 Solanum tuberosum PGSC0003DMG400029384 I 0.719
PRUPE_ppa011917mg Prunus persica PRUPE_ppa011917mg I 0.719
Sb10g001350 Sorghum bicolor Sb10g001350 I 0.719
Si008818m.g Setaria italica Si008818m.g I 0.719
Solyc08g005430.2 Solanum lycopersicum Solyc08g005430.2 I 0.719
Solyc12g096070.1 Solanum lycopersicum Solyc12g096070.1 I 0.719
Traes_2AL_07B1977B8 Triticum aestivum Traes_2AL_07B1977B8 I 0.719
Traes_2DL_3B4943F11 Triticum aestivum Traes_2DL_3B4943F11 I 0.719
TRIUR3_01357 Triticum urartu TRIUR3_01357 I 0.719
Pm023072 Prunus mume Pm023072 I 0.719
30190.m011066 Ricinus communis 30190.m011066 I 0.719
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.719
mgf002023m Mimulus guttatus mgf002023m I 0.719
Eucgr.D02603 Eucalyptus grandis Eucgr.D02603 I 0.719
gene13517-v1.0-hybrid Fragaria vesca gene13517-v1.0-hybrid I 0.719
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.719
Pavir.Da02366 Panicum virgatum Pavir.Da02366 I 0.719
Pavir.Db02421 Panicum virgatum Pavir.Db02421 I 0.719
OB03G39940 Oryza brachyantha OB03G39940 I 0.704