Thhalv10002643m.g (Eutrema salsugineum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Thhalv10002643m.g T351784_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.881 0.881
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.881 0.881
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002643m WRC 83 124

Links

Other WRC family TFs
Other Eutrema salsugineum TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra015184 Brassica rapa Bra015184 I 0.952
AtGRF6 Arabidopsis thaliana AT2G06200 D 0.881
AtGRF6 Arabidopsis lyrata fgenesh2_kg.3__2919__AT2G06200.1 I 0.881
Bostr.24399s0028 Boechera stricta Bostr.24399s0028 I 0.881
Cagra.0757s0005 Capsella grandiflora Cagra.0757s0005 I 0.881
Carubv10015887m.g Capsella rubella Carubv10015887m.g I 0.881
GLYMA09G07990 Glycine max GLYMA09G07990 I 0.833
GLYMA13G16924 Glycine max GLYMA13G16924 I 0.833
GLYMA15G19460 Glycine max GLYMA15G19460 I 0.833
GLYMA17G05800 Glycine max GLYMA17G05800 I 0.833
MTR_2g041430 Medicago truncatula MTR_2g041430 I 0.833
MTR_4g125490 Medicago truncatula MTR_4g125490 I 0.833
POPTR_0003s06360 Populus trichocarpa POPTR_0003s06360 I 0.833
POPTR_0018s07140 Populus trichocarpa POPTR_0018s07140 I 0.833
TCM_037550 Theobroma cacao TCM_037550 I 0.833
VIT_09s0002g01350 Vitis vinifera VIT_09s0002g01350 I 0.833
Ca_11607 Cicer arietinum Ca_11607 I 0.833
Cla011348 Citrullus lanatus Cla011348 I 0.833
Cla017125 Citrullus lanatus Cla017125 I 0.833
29739.m003775 Ricinus communis 29739.m003775 I 0.833
cassava39602.m1 Manihot esculenta cassava39602.m1 I 0.833
cassava40748.m1 Manihot esculenta cassava40748.m1 I 0.833
Cucsa.117300 Cucumis sativus Cucsa.117300 I 0.833
Cucsa.141640 Cucumis sativus Cucsa.141640 I 0.833
Ciclev10008922m.g Citrus clementina Ciclev10008922m.g I 0.833
Eucgr.C00823 Eucalyptus grandis Eucgr.C00823 I 0.833
evm.TU.supercontig_28.61 Carica papaya evm.TU.supercontig_28.61 I 0.833
Gorai.009G035200 Gossypium raimondii Gorai.009G035200 I 0.833
Lus10000473.g Linum usitatissimum Lus10000473.g I 0.833
Lus10015651.g Linum usitatissimum Lus10015651.g I 0.833
Lus10033441.g Linum usitatissimum Lus10033441.g I 0.833
Lus10037668.g Linum usitatissimum Lus10037668.g I 0.833
orange1.1g023105m.g Citrus sinensis orange1.1g023105m.g I 0.833
SapurV1A.0087s0080 Salix purpurea SapurV1A.0087s0080 I 0.833
PK09793.1 Cannabis sativa PK09793.1 I 0.833
LjT10E17.120.nd Lotus japonicus LjT10E17.120.nd I 0.833
PRUPE_ppa015791mg Prunus persica PRUPE_ppa015791mg I 0.814
Pm027054 Prunus mume Pm027054 I 0.814
gene12474-v1.0-hybrid Fragaria vesca gene12474-v1.0-hybrid I 0.814
Gorai.013G225300 Gossypium raimondii Gorai.013G225300 I 0.814
MDP0000274400 Malus domestica MDP0000274400 I 0.814
GRF1 Oryza indica BGIOSGA005497 I 0.810
BRADI3G57267 Brachypodium distachyon BRADI3G57267 I 0.810
BRADI5G20607 Brachypodium distachyon BRADI5G20607 I 0.810
F775_24390 Aegilops tauschii F775_24390 I 0.810
GLYMA01G44471 Glycine max GLYMA01G44471 I 0.810
GLYMA07G04290 Glycine max GLYMA07G04290 I 0.810
GLYMA11G01060 Glycine max GLYMA11G01060 I 0.810
GLYMA11G11826 Glycine max GLYMA11G11826 I 0.810
GLYMA12G01730 Glycine max GLYMA12G01730 I 0.810
GLYMA16G00971 Glycine max GLYMA16G00971 I 0.810
GRMZM2G105335 Zea mays GRMZM2G105335 I 0.810
GSMUA_Achr8G30640_001 Musa acuminata GSMUA_Achr8G30640_001 I 0.810
LPERR02G28430 Leersia perrieri LPERR02G28430 I 0.810
MTR_0001s0490 Medicago truncatula MTR_0001s0490 I 0.810
MTR_8g020560 Medicago truncatula MTR_8g020560 I 0.810
OB02G41370 Oryza brachyantha OB02G41370 I 0.810
OBART02G34550 Oryza barthii OBART02G34550 I 0.810
OGLUM02G35690 Oryza glumaepatula OGLUM02G35690 I 0.810
OMERI02G32800 Oryza meridionalis OMERI02G32800 I 0.810
ONIVA02G36590 Oryza nivara ONIVA02G36590 I 0.810
OPUNC02G31900 Oryza punctata OPUNC02G31900 I 0.810
ORGLA02G0298900 Oryza glaberrima ORGLA02G0298900 I 0.810
ORUFI02G36060 Oryza rufipogon ORUFI02G36060 I 0.810
GRF1 Oryza sativa OS02G0776900 I 0.810
PGSC0003DMG400013004 Solanum tuberosum PGSC0003DMG400013004 I 0.810
POPTR_0006s14560 Populus trichocarpa POPTR_0006s14560 I 0.810
PRUPE_ppa017593mg Prunus persica PRUPE_ppa017593mg I 0.810
Sb04g034800 Sorghum bicolor Sb04g034800 I 0.810
Si017511m.g Setaria italica Si017511m.g I 0.810
Solyc07g041640.2 Solanum lycopersicum Solyc07g041640.2 I 0.810
Traes_2AL_07B1977B8 Triticum aestivum Traes_2AL_07B1977B8 I 0.810
Traes_2DL_3B4943F11 Triticum aestivum Traes_2DL_3B4943F11 I 0.810
Traes_6AL_F5BFFCA3E Triticum aestivum Traes_6AL_F5BFFCA3E I 0.810
Traes_6DL_4C3F04219 Triticum aestivum Traes_6DL_4C3F04219 I 0.810
Ca_10012 Cicer arietinum Ca_10012 I 0.810
Ca_23149 Cicer arietinum Ca_23149 I 0.810
Cla012781 Citrullus lanatus Cla012781 I 0.810
Pm013274 Prunus mume Pm013274 I 0.810
29706.m001283 Ricinus communis 29706.m001283 I 0.810
cassava34867.m1 Manihot esculenta cassava34867.m1 I 0.810
Cucsa.192190 Cucumis sativus Cucsa.192190 I 0.810
mgf020920m Mimulus guttatus mgf020920m I 0.810
Aquca_076_00086 Aquilegia coerulea Aquca_076_00086 I 0.810
Ciclev10025855m.g Citrus clementina Ciclev10025855m.g I 0.810
evm.TU.supercontig_25.118 Carica papaya evm.TU.supercontig_25.118 I 0.810
gene07429-v1.0-hybrid Fragaria vesca gene07429-v1.0-hybrid I 0.810
Gorai.011G058800 Gossypium raimondii Gorai.011G058800 I 0.810
MDP0000243533 Malus domestica MDP0000243533 I 0.810
orange1.1g047108m.g Citrus sinensis orange1.1g047108m.g I 0.810
Pavir.J14128 Panicum virgatum Pavir.J14128 I 0.810
SapurV1A.0002s0920 Salix purpurea SapurV1A.0002s0920 I 0.810
SapurV1A.0177s0310 Salix purpurea SapurV1A.0177s0310 I 0.810
SapurV1A.0616s0110 Salix purpurea SapurV1A.0616s0110 I 0.810
SapurV1A.3612s0010 Salix purpurea SapurV1A.3612s0010 I 0.810
PK28107.1 Cannabis sativa PK28107.1 I 0.810
chr3.CM0127.490.nc Lotus japonicus chr3.CM0127.490.nc I 0.810
LjT02E24.10.nc Lotus japonicus LjT02E24.10.nc I 0.810
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.800
BGIOSGA005785 Oryza indica BGIOSGA005785 I 0.791
BGIOSGA014417 Oryza indica BGIOSGA014417 I 0.791
GRMZM2G034876 Zea mays GRMZM2G034876 I 0.791
GRMZM2G041223 Zea mays GRMZM2G041223 I 0.791
GRMZM2G129147 Zea mays GRMZM2G129147 I 0.791
GSMUA_Achr1G21940_001 Musa acuminata GSMUA_Achr1G21940_001 I 0.791
LPERR02G23730 Leersia perrieri LPERR02G23730 I 0.791
LPERR04G19760 Leersia perrieri LPERR04G19760 I 0.791
OB04G31020 Oryza brachyantha OB04G31020 I 0.791
OBART02G29160 Oryza barthii OBART02G29160 I 0.791
OBART04G24070 Oryza barthii OBART04G24070 I 0.791
OGLUM02G29770 Oryza glumaepatula OGLUM02G29770 I 0.791
OGLUM04G24010 Oryza glumaepatula OGLUM04G24010 I 0.791
OLONG_003255 Oryza longistaminata OLONG_003255 I 0.791
OLONG_008372 Oryza longistaminata OLONG_008372 I 0.791
OMERI02G28100 Oryza meridionalis OMERI02G28100 I 0.791
OMERI04G19930 Oryza meridionalis OMERI04G19930 I 0.791
ONIVA02G31920 Oryza nivara ONIVA02G31920 I 0.791
ONIVA04G23220 Oryza nivara ONIVA04G23220 I 0.791
OPUNC02G26750 Oryza punctata OPUNC02G26750 I 0.791
OPUNC04G21620 Oryza punctata OPUNC04G21620 I 0.791
ORGLA04G0206400 Oryza glaberrima ORGLA04G0206400 I 0.791
ORUFI02G30740 Oryza rufipogon ORUFI02G30740 I 0.791
ORUFI04G25800 Oryza rufipogon ORUFI04G25800 I 0.791
OS04G0600900 Oryza sativa OS04G0600900 I 0.791
Sb04g030770 Sorghum bicolor Sb04g030770 I 0.791
Sb06g027465 Sorghum bicolor Sb06g027465 I 0.791
Si017449m.g Setaria italica Si017449m.g I 0.791
cassava2802.m1 Manihot esculenta cassava2802.m1 I 0.791
Pavir.Aa00789 Panicum virgatum Pavir.Aa00789 I 0.791
Pavir.Ab02786 Panicum virgatum Pavir.Ab02786 I 0.791
BGIOSGA022056 Oryza indica BGIOSGA022056 I 0.786
BRADI1G50597 Brachypodium distachyon BRADI1G50597 I 0.786
F775_19681 Aegilops tauschii F775_19681 I 0.786
F775_52301 Aegilops tauschii F775_52301 I 0.786
GRMZM2G098594 Zea mays GRMZM2G098594 I 0.786
GSMUA_Achr10G06370_001 Musa acuminata GSMUA_Achr10G06370_001 I 0.786
GSMUA_Achr2G04650_001 Musa acuminata GSMUA_Achr2G04650_001 I 0.786
GSMUA_Achr7G02330_001 Musa acuminata GSMUA_Achr7G02330_001 I 0.786
LPERR06G01000 Leersia perrieri LPERR06G01000 I 0.786
OB06G11200 Oryza brachyantha OB06G11200 I 0.786
OBART06G01070 Oryza barthii OBART06G01070 I 0.786
OGLUM06G01060 Oryza glumaepatula OGLUM06G01060 I 0.786
OMERI06G01060 Oryza meridionalis OMERI06G01060 I 0.786
ONIVA06G01450 Oryza nivara ONIVA06G01450 I 0.786
OPUNC06G01050 Oryza punctata OPUNC06G01050 I 0.786
ORGLA06G0010200 Oryza glaberrima ORGLA06G0010200 I 0.786
ORUFI06G01080 Oryza rufipogon ORUFI06G01080 I 0.786
PGSC0003DMG400018491 Solanum tuberosum PGSC0003DMG400018491 I 0.786
PGSC0003DMG400030881 Solanum tuberosum PGSC0003DMG400030881 I 0.786
POPTR_0001s16920 Populus trichocarpa POPTR_0001s16920 I 0.786
POPTR_0013s07500 Populus trichocarpa POPTR_0013s07500 I 0.786
PRUPE_ppa022199mg Prunus persica PRUPE_ppa022199mg I 0.786
Sb10g001350 Sorghum bicolor Sb10g001350 I 0.786
Si008818m.g Setaria italica Si008818m.g I 0.786
Solyc08g005430.2 Solanum lycopersicum Solyc08g005430.2 I 0.786
Solyc08g075950.1 Solanum lycopersicum Solyc08g075950.1 I 0.786
TCM_025561 Theobroma cacao TCM_025561 I 0.786
TCM_029130 Theobroma cacao TCM_029130 I 0.786
Traes_6AL_EEA5F4238 Triticum aestivum Traes_6AL_EEA5F4238 I 0.786
TRIUR3_01357 Triticum urartu TRIUR3_01357 I 0.786
VIT_11s0016g01250 Vitis vinifera VIT_11s0016g01250 I 0.786
VIT_16s0039g01450 Vitis vinifera VIT_16s0039g01450 I 0.786
Cla006913 Citrullus lanatus Cla006913 I 0.786
Pm019573 Prunus mume Pm019573 I 0.786
30073.m002312 Ricinus communis 30073.m002312 I 0.786
cassava14256.m1 Manihot esculenta cassava14256.m1 I 0.786
cassava41970.valid.m1 Manihot esculenta cassava41970.valid.m1 I 0.786
Cucsa.017410 Cucumis sativus Cucsa.017410 I 0.786
mgf002023m Mimulus guttatus mgf002023m I 0.786
mgf026507m Mimulus guttatus mgf026507m I 0.786
Aquca_052_00053 Aquilegia coerulea Aquca_052_00053 I 0.786
Ciclev10032065m.g Citrus clementina Ciclev10032065m.g I 0.786
Eucgr.F04420 Eucalyptus grandis Eucgr.F04420 I 0.786
gene12549-v1.0-hybrid Fragaria vesca gene12549-v1.0-hybrid I 0.786
Gorai.003G057700 Gossypium raimondii Gorai.003G057700 I 0.786
Gorai.013G184200 Gossypium raimondii Gorai.013G184200 I 0.786
Lus10000468.g Linum usitatissimum Lus10000468.g I 0.786
Lus10009533.g Linum usitatissimum Lus10009533.g I 0.786
Lus10020352.g Linum usitatissimum Lus10020352.g I 0.786
orange1.1g020051m.g Citrus sinensis orange1.1g020051m.g I 0.786
Pavir.Da02366 Panicum virgatum Pavir.Da02366 I 0.786
Pavir.Db02421 Panicum virgatum Pavir.Db02421 I 0.786
SapurV1A.0568s0060 Salix purpurea SapurV1A.0568s0060 I 0.786
PDK_20s1344231g002 Phoenix dactylifera PDK_20s1344231g002 I 0.786
AMTR_s00024p00228870 Amborella trichopoda AMTR_s00024p00228870 I 0.767
BRADI3G52547 Brachypodium distachyon BRADI3G52547 I 0.767
Si011853m.g Setaria italica Si011853m.g I 0.767
Pavir.Ga00724 Panicum virgatum Pavir.Ga00724 I 0.767
Pavir.Gb00674 Panicum virgatum Pavir.Gb00674 I 0.767
Pavir.J03212 Panicum virgatum Pavir.J03212 I 0.767
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.762
BGIOSGA022506 Oryza indica BGIOSGA022506 I 0.762
F775_13620 Aegilops tauschii F775_13620 I 0.762
GSMUA_Achr1G23840_001 Musa acuminata GSMUA_Achr1G23840_001 I 0.762
GSMUA_AchrUn_randomG04320_001 Musa acuminata GSMUA_AchrUn_randomG04320_001 I 0.762
LPERR06G06090 Leersia perrieri LPERR06G06090 I 0.762
MLOC_64055 Hordeum vulgare MLOC_64055 I 0.762
OGLUM06G07010 Oryza glumaepatula OGLUM06G07010 I 0.762
OLONG_006788 Oryza longistaminata OLONG_006788 I 0.762
OMERI06G07610 Oryza meridionalis OMERI06G07610 I 0.762
OPUNC06G06310 Oryza punctata OPUNC06G06310 I 0.762
ORGLA06G0059900 Oryza glaberrima ORGLA06G0059900 I 0.762
ORUFI06G06870 Oryza rufipogon ORUFI06G06870 I 0.762
GRF2 Oryza sativa OS06G0204800 I 0.762
PGSC0003DMG400029384 Solanum tuberosum PGSC0003DMG400029384 I 0.762
Solyc12g096070.1 Solanum lycopersicum Solyc12g096070.1 I 0.762
TCM_016120 Theobroma cacao TCM_016120 I 0.762
TRIUR3_30418 Triticum urartu TRIUR3_30418 I 0.762
30190.m011066 Ricinus communis 30190.m011066 I 0.762
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.762
cassava41173.m1 Manihot esculenta cassava41173.m1 I 0.762
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.762
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I 0.762
Lus10004455.g Linum usitatissimum Lus10004455.g I 0.762
orange1.1g028751m.g Citrus sinensis orange1.1g028751m.g I 0.762
BRADI1G46427 Brachypodium distachyon BRADI1G46427 I 0.744
VIT_02s0025g04910 Vitis vinifera VIT_02s0025g04910 I 0.744
AMTR_s00040p00189460 Amborella trichopoda AMTR_s00040p00189460 I 0.738
GRF5 Arabidopsis thaliana AT3G13960 I 0.738
Bo1g134740 Brassica oleracea Bo1g134740 I 0.738
Bo3g065850 Brassica oleracea Bo3g065850 I 0.738
Bra001532 Brassica rapa Bra001532 I 0.738
Bra021521 Brassica rapa Bra021521 I 0.738
Bra027384 Brassica rapa Bra027384 I 0.738
AtGRF5 Arabidopsis lyrata fgenesh2_kg.3__1504__AT3G13960.1 I 0.738
GRMZM5G850129 Zea mays GRMZM5G850129 I 0.738
GSMUA_Achr6G01270_001 Musa acuminata GSMUA_Achr6G01270_001 I 0.738
POPTR_0001s01480 Populus trichocarpa POPTR_0001s01480 I 0.738
POPTR_0003s10000 Populus trichocarpa POPTR_0003s10000 I 0.738
PRUPE_ppa011917mg Prunus persica PRUPE_ppa011917mg I 0.738
Pm023072 Prunus mume Pm023072 I 0.738
Bostr.28625s0309 Boechera stricta Bostr.28625s0309 I 0.738
Cagra.0736s0034 Capsella grandiflora Cagra.0736s0034 I 0.738
Carubv10013860m.g Capsella rubella Carubv10013860m.g I 0.738
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.738
Eucgr.D02603 Eucalyptus grandis Eucgr.D02603 I 0.738
gene13517-v1.0-hybrid Fragaria vesca gene13517-v1.0-hybrid I 0.738
SapurV1A.0051s0520 Salix purpurea SapurV1A.0051s0520 I 0.738
SapurV1A.0063s0420 Salix purpurea SapurV1A.0063s0420 I 0.738
Thhalv10020873m.g Eutrema salsugineum Thhalv10020873m.g I 0.738
Bo5g131870 Brassica oleracea Bo5g131870 I 0.721
POPTR_0019s05910 Populus trichocarpa POPTR_0019s05910 I 0.721
Pavir.Da01847 Panicum virgatum Pavir.Da01847 I 0.721
GLYMA13G21625 Glycine max GLYMA13G21625 N 0.714
Sb10g006690 Sorghum bicolor Sb10g006690 N 0.714
SELMODRAFT_442384 Selaginella moellendorffii SELMODRAFT_442384 I 0.714
SELMODRAFT_442763 Selaginella moellendorffii SELMODRAFT_442763 I 0.714
Si006922m.g Setaria italica Si006922m.g N 0.714
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.714
29700.m000761 Ricinus communis 29700.m000761 I 0.714
Aquca_013_00537 Aquilegia coerulea Aquca_013_00537 I 0.714
MDP0000276970 Malus domestica MDP0000276970 I 0.714
SapurV1A.0326s0130 Salix purpurea SapurV1A.0326s0130 I 0.714