CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.scaffold_236000008
(
Physcomitrella patens
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
fgenesh1_pg.scaffold_236000008
T355659_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_236000008
WRKY
349
407
DDGHRGWKKYGNKSIQNSNHCRGYYKCSVKECRAKKMVQPTDKDPMVFEITYVGKHTCS
Links
Other
WRKY
family TFs
Other
Physcomitrella patens
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.scaffold_195000041
Physcomitrella patens
fgenesh1_pg.scaffold_195000041
N
0.883
fgenesh1_pg.scaffold_280000027
Physcomitrella patens
fgenesh1_pg.scaffold_280000027
N
0.874
estExt_fgenesh1_pg.C_840061
Physcomitrella patens
estExt_fgenesh1_pg.C_840061
N
0.855
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.811
PK08266.1
Cannabis sativa
PK08266.1
N
0.809