CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AACERI_AaceriAGL099C
(
Saccharomycetaceae sp ashbya aceri
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
AACERI_AaceriAGL099C
T359177_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UME6
M00081_2.00
Saccharomyces cerevisiae
NDHCDHGDHN
NDHCDHGDHN
PBM
Badis et al.(2008)
UME6_2040
0.565
0.763
UME6
M01575_2.00
Saccharomyces cerevisiae
VGCGSNWNN
NNWNSCGCB
PBM
Zhu et al.(2009)
Ume6
0.565
0.763
UME6
M08653_2.00
Saccharomyces cerevisiae
NSGCGGYWV
BWRCCGCSN
Misc
DeBoer et al.(2011)
YDR207C_511
0.565
0.763
UME6
M08468_2.00
Saccharomyces cerevisiae
TSGGCGGCTAWWT
AWWTAGCCGCCSA
COMPILED
Mathelier et al.(2014)
MA0412.1
0.565
0.763
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGO13770
Zinc cluster
677
714
TGCWICRLRKKKCSEERPQCSNCLRLNLECVYDIIKPD
Links
Other
Zinc cluster
family TFs
Other
Saccharomycetaceae sp ashbya aceri
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AGL099C
Ashbya gossypii
AGOS_AGL099C
I
0.683
Ecym_4153
Eremothecium cymbalariae
Ecym_4153
I
0.651
KLTH0F08074g
Lachancea thermotolerans
KLTH0F08074g
I
0.618
KLTH0F08074g
Kluyveromyces thermotolerans
KLTH0F08074g
I
0.618
TPHA_0C02220
Tetrapisispora phaffii
TPHA_0C02220
N
0.605
CAGL0F05357g
Candida glabrata
CAGL0F05357g
I
0.601
Kwal_3178
Kluyveromyces waltii
Kwal_3178
I
0.588
SU7_2610
Saccharomyces arboricola
SU7_2610
I
0.565
UME6
Saccharomyces cerevisiae
YDR207C
D
0.565
ZBAI_01674
Zygosaccharomyces bailii
ZBAI_01674
I
0.565
ZYRO0C04686g
Zygosaccharomyces rouxii
ZYRO0C04686g
I
0.565
4144_YDR207C
Saccharomyces mikatae
4144_YDR207C
I
0.565
4486_YDR207C
Saccharomyces bayanus
4486_YDR207C
I
0.565
4509_YDR207C
Saccharomyces paradoxus
4509_YDR207C
I
0.565
KLLA0_F20680g
Kluyveromyces lactis
KLLA0_F20680g
I
0.556
SAKL0H13266g
Lachancea kluyveri
SAKL0H13266g
I
0.548
TDEL_0F05400
Torulaspora delbrueckii
TDEL_0F05400
I
0.547