4509_YDR207C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4509_YDR207C T390852_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UME6
M00081_2.00 		Saccharomyces cerevisiae
NDHCDHGDHN
NDHCDHGDHN		 PBM
Badis et al.(2008)
UME6_2040 		0.683 1.000
UME6
M01575_2.00 		Saccharomyces cerevisiae
VGCGSNWNN
NNWNSCGCB		 PBM
Zhu et al.(2009)
Ume6 		0.683 1.000
UME6
M08653_2.00 		Saccharomyces cerevisiae
NSGCGGYWV
BWRCCGCSN		 Misc
DeBoer et al.(2011)
YDR207C_511 		0.683 1.000
UME6
M08468_2.00 		Saccharomyces cerevisiae
TSGGCGGCTAWWT
AWWTAGCCGCCSA		 COMPILED
Mathelier et al.(2014)
MA0412.1 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4509_YDR207C Zinc cluster 772 809

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_2610 Saccharomyces arboricola SU7_2610 I 0.683
UME6 Saccharomyces cerevisiae YDR207C D 0.683
4144_YDR207C Saccharomyces mikatae 4144_YDR207C I 0.683
4486_YDR207C Saccharomyces bayanus 4486_YDR207C I 0.676
CAGL0F05357g Candida glabrata CAGL0F05357g I 0.613
ZBAI_01674 Zygosaccharomyces bailii ZBAI_01674 I 0.602
ZYRO0C04686g Zygosaccharomyces rouxii ZYRO0C04686g I 0.602
KLTH0F08074g Lachancea thermotolerans KLTH0F08074g I 0.601
KLTH0F08074g Kluyveromyces thermotolerans KLTH0F08074g I 0.601
Kwal_3178 Kluyveromyces waltii Kwal_3178 I 0.601
TDEL_0F05400 Torulaspora delbrueckii TDEL_0F05400 I 0.596
NDAI_0C04790 Naumovozyma dairenensis NDAI_0C04790 I 0.581
AACERI_AaceriAGL099C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL099C I 0.565
AGOS_AGL099C Ashbya gossypii AGOS_AGL099C I 0.565
Ecym_4153 Eremothecium cymbalariae Ecym_4153 I 0.565
SAKL0H13266g Lachancea kluyveri SAKL0H13266g I 0.561
TBLA_0H00720 Tetrapisispora blattae TBLA_0H00720 I 0.557
KLLA0_F20680g Kluyveromyces lactis KLLA0_F20680g I 0.553