CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0E03830
(
Tetrapisispora phaffii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TPHA_0E03830
T385039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
URC2
M00083_2.00
Saccharomyces cerevisiae
CGGVNWWHNN
NNDWWNBCCG
PBM
Badis et al.(2008)
YDR520c_2043
0.578
0.641
URC2
M01578_2.00
Saccharomyces cerevisiae
NNNNNNNNDN
NHNNNNNNNN
PBM
Zhu et al.(2009)
Ydr520c
0.578
0.641
URC2
M07510_2.00
Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1
0.578
0.641
URC2
M08659_2.00
Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD
Misc
DeBoer et al.(2011)
YDR520C_553
0.578
0.641
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE63472
Zinc cluster
111
151
FSCDTCRKFKTRCDFEPLVGKCHRCNMLQINCSLTTEREHE
Links
Other
Zinc cluster
family TFs
Other
Tetrapisispora phaffii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Kpol_2002p26
Vanderwaltozyma polyspora
Kpol_2002p26
I
0.600
KAFR_0G01220
Kazachstania africana
KAFR_0G01220
I
0.596
5357_YDR520C
Saccharomyces paradoxus
5357_YDR520C
I
0.579
SU7_2814
Saccharomyces arboricola
SU7_2814
I
0.578
URC2
Saccharomyces cerevisiae
YDR520C
D
0.578
5824_YDR520C
Saccharomyces bayanus
5824_YDR520C
I
0.578