STB4 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YMR019W T388369_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB4
M00100_2.00		 Saccharomyces cerevisiae
NWCGGRWNNN
NNNWYCCGWN		 PBM
Badis et al.(2008)
STB4_2129		 (Direct) (Direct)
STB4
M00927_2.00		 Saccharomyces cerevisiae
NTTCSGAKMN
NKMTCSGAAN		 PBM
Gordan et al.(2011)
Stb4		 (Direct) (Direct)
STB4
M07527_2.00		 Saccharomyces cerevisiae
YTCGGAA
TTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0391.1		 (Direct) (Direct)
STB4
M08686_2.00		 Saccharomyces cerevisiae
YTCGGAA
TTCCGAR		 Misc
DeBoer et al.(2011)
YMR019W_483		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00100_2.00 Zinc cluster 51 89
M00927_2.00 Zinc cluster 1 39

DNA Binding Domains

Protein ID Domain From To Sequence
YMR019W Zinc cluster 85 123

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
17249_YMR019W Saccharomyces paradoxus 17249_YMR019W I 0.659
17664_YMR019W Saccharomyces bayanus 17664_YMR019W I 0.659
SKUD_205412 Saccharomyces kudriavzevii SKUD_205412 I 0.658
16481_YMR019W Saccharomyces mikatae 16481_YMR019W I 0.643
SU7_2505 Saccharomyces arboricola SU7_2505 I 0.626