CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF398
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000010531
T104556_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.822
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000009614
C2H2 ZF
334
355
FSCHHCGKSLSQDMLLTHQCSH
ENSOPRP00000009614
C2H2 ZF
385
406
TCPHCARTFTHPSRLTYHLRVH
ENSOPRP00000009614
C2H2 ZF
413
435
FPCPDCPKRFADQARLTSHRHAH
ENSOPRP00000009614
C2H2 ZF
441
463
FRCTQCGRSFSLKISLLLHQRGH
ENSOPRP00000009614
C2H2 ZF
469
491
FSCPQCGIDFNGHSALIRHQMIH
ENSOPRP00000009614
C2H2 ZF
497
519
YPCTDCSKSFMRKEHLLNHRRLH
ENSOPRP00000009614
C2H2 ZF
525
547
FSCAHCGKSFIRKHHLMKHQRIH
ENSOPRP00000009614
C2H2 ZF
553
576
YPCSYCGRSFRYKQTLKDHLRSGH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy