ZNF398 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000010531 T104556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH

DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.822 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000009614 C2H2 ZF 334 355
ENSOPRP00000009614 C2H2 ZF 385 406
ENSOPRP00000009614 C2H2 ZF 413 435
ENSOPRP00000009614 C2H2 ZF 441 463
ENSOPRP00000009614 C2H2 ZF 469 491
ENSOPRP00000009614 C2H2 ZF 497 519
ENSOPRP00000009614 C2H2 ZF 525 547
ENSOPRP00000009614 C2H2 ZF 553 576

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_04748 Ancylostoma caninum ANCCAN_04748 I 0.000
ANCCEY_09710 Ancylostoma ceylanicum ANCCEY_09710 I 0.000
Bm5937 Brugia malayi Bm5937 I 0.000
BTMF_0000940801 Brugia timori BTMF_0000940801 I 0.000
BXY_0544800 Bursaphelenchus xylophilus BXY_0544800 I 0.000
CBG01382 Caenorhabditis briggsae CBG01382 I 0.000
CBN09492 Caenorhabditis brenneri CBN09492 I 0.000
CBN29810 Caenorhabditis brenneri CBN29810 I 0.000
CJA09451 Caenorhabditis japonica CJA09451 I 0.000
CRE08815 Caenorhabditis remanei CRE08815 I 0.000
DICVIV_01396 Dictyocaulus viviparus DICVIV_01396 I 0.000
EVEC_0001219101 Enterobius vermicularis EVEC_0001219101 I 0.000
GPLIN_001033000 Globodera pallida GPLIN_001033000 N 0.000
Hba_11006 Heterorhabditis bacteriophora Hba_11006 I 0.000
HPBE_0001572101 Heligmosomoides bakeri HPBE_0001572101 I 0.000
HPLM_0000403401 Haemonchus placei HPLM_0000403401 I 0.000
L596_g1691 Steinernema carpocapsae L596_g1691 I 0.000
L889_g31510 Steinernema feltiae L889_g31510 I 0.000
L892_g20637 Steinernema scapterisci L892_g20637 I 0.000
L893_g13923 Steinernema glaseri L893_g13923 I 0.000
LOAG_04009 Loa loa LOAG_04009 I 0.000
maker-nMf.1.1.scaf00497-augustus-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf00497-augustus-gene-0.10 N 0.000
MhA1_Contig1499.frz3.gene12 Meloidogyne hapla MhA1_Contig1499.frz3.gene12 N 0.000
nAv.1.0.1.g08649 Acanthocheilonema viteae nAv.1.0.1.g08649 I 0.000
NECAME_09584 Necator americanus NECAME_09584 I 0.000
PPA14239 Pristionchus pacificus PPA14239 I 0.000
RSKR_0000332900 Rhabditophanes kr3021 RSKR_0000332900 N 0.000
scaffold1063-EXSNAP2012.7 Pristionchus exspectatus scaffold1063-EXSNAP2012.7 I 0.000
SPAL_0000741800 Strongyloides papillosus SPAL_0000741800 I 0.000
SSTP_0001193100 Strongyloides stercoralis SSTP_0001193100 I 0.000
SVE_1023400 Strongyloides venezuelensis SVE_1023400 I 0.000
SVUK_0000327101 Strongylus vulgaris SVUK_0000327101 I 0.000
TCLT_0000991301 Thelazia callipaeda TCLT_0000991301 N 0.000
dmd-8 Caenorhabditis elegans WBGene00020708 D 0.000