AMTR_s00150p00091360 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00150p00091360 T000397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.847 0.961
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.847 0.961
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.717 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN08462 AP2 5 56

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cflo_10057--XP_001120643.1_APIME Camponotus floridanus Cflo_10057--XP_001120643.1_APIME N 0.000
SINV11343 Solenopsis invicta SINV11343 N 0.000