GLYMA01G39520 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA01G39520 T001721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.867 0.990
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.839 0.939
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.836 0.939
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.821 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G39520.1 AP2 149 198
GLYMA01G39520.1 AP2 241 292
GLYMA01G39520.2 AP2 149 198
GLYMA01G39520.2 AP2 241 292
GLYMA01G39520.3 AP2 149 198
GLYMA01G39520.3 AP2 241 292
GLYMA01G39520.4 AP2 149 198
GLYMA01G39520.4 AP2 241 292
GLYMA01G39520.5 AP2 149 198
GLYMA01G39520.5 AP2 241 292

Links

Other AP2 family TFs
Other Glycine max TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28752.m000339 Ricinus communis 28752.m000339 I 0.858
29169.m000017 Ricinus communis 29169.m000017 I 0.857
29805.m001494 Ricinus communis 29805.m001494 I 0.867
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.858
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.812
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.845
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.850
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.858
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.836
AP2 Arabidopsis thaliana AT4G36920 I 0.867
TOE3 Arabidopsis thaliana AT5G67180 I 0.818
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.841
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.858
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.858
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.845
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.834
Bo1g004960 Brassica oleracea Bo1g004960 I 0.867
Bo4g070350 Brassica oleracea Bo4g070350 I 0.835
Bo7g064000 Brassica oleracea Bo7g064000 I 0.811
Bo7g118400 Brassica oleracea Bo7g118400 I 0.867
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.818
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.867
Bra011741 Brassica rapa Bra011741 I 0.867
Bra011939 Brassica rapa Bra011939 I 0.835
Bra012139 Brassica rapa Bra012139 I 0.811
Bra017809 Brassica rapa Bra017809 I 0.867
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.814
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.833
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.856
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.857
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.818
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.836
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.867
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.867
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.836
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.818
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.857
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.858
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.811
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.854
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.858
Ca_02499 Cicer arietinum Ca_02499 I 0.858
Ca_09295 Cicer arietinum Ca_09295 I 0.867
Ca_12010 Cicer arietinum Ca_12010 I 0.841
Ca_14618 Cicer arietinum Ca_14618 I 0.846
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.854
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.858
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.783
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.830
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.853
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.810
Cla000716 Citrullus lanatus Cla000716 I 0.868
Cla018124 Citrullus lanatus Cla018124 I 0.854
Cla018549 Citrullus lanatus Cla018549 I 0.777
Cla020549 Citrullus lanatus Cla020549 I 0.790
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.842
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.781
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.868
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.854
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.861
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.818
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.852
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.858
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.841
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.794
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.868
F775_32962 Aegilops tauschii F775_32962 I 0.856
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.818
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.867
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.812
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.852
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.800
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.857
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.868
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.858
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.858
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.858
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.831
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.868
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.835
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.859
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.868
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.856
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.865
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.865
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.842
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.848
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.821
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.858
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.833
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.802
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.854
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.830
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.859
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.836
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.867
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.868
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.868
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.856
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.838
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.832
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.827
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.841
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.838
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.830
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.862
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.815
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.859
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.824
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.839
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.866
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.851
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.855
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.795
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.842
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.829
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.856
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.827
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.826
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.856
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.834
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.852
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.834
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.794
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.820
MDP0000137561 Malus domestica MDP0000137561 I 0.851
MDP0000163645 Malus domestica MDP0000163645 I 0.816
MDP0000181606 Malus domestica MDP0000181606 I 0.854
MDP0000200319 Malus domestica MDP0000200319 I 0.859
mgf005133m Mimulus guttatus mgf005133m I 0.833
mgf009315m Mimulus guttatus mgf009315m I 0.867
mgf010466m Mimulus guttatus mgf010466m I 0.833
mgf021945m Mimulus guttatus mgf021945m I 0.855
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.813
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.833
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.855
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.834
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.867
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.868
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.841
OB03G45870 Oryza brachyantha OB03G45870 I 0.833
OB06G29960 Oryza brachyantha OB06G29960 I 0.845
OBART07G08110 Oryza barthii OBART07G08110 I 0.834
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.841
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.858
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.845
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.834
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.834
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.795
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.841
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.858
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.845
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.834
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.834
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.841
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.858
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.845
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.841
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.858
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.858
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.844
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.834
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.830
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.858
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.810
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.858
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.858
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.834
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.841
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.858
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.845
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.834
OS03G0818800 Oryza sativa OS03G0818800 I 0.798
OS05G0121600 Oryza sativa OS05G0121600 I 0.858
OS07G0235800 Oryza sativa OS07G0235800 I 0.834
P93632_MAIZE Zea mays P93632_MAIZE D 0.821
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.833
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.815
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.858
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.858
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.830
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.831
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.811
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.830
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.858
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.868
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.866
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.841
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.858
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.855
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.859
PK02403.1 Cannabis sativa PK02403.1 I 0.868
PK07183.1 Cannabis sativa PK07183.1 I 0.858
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Pm000974 Prunus mume Pm000974 I 0.854
Pm002492 Prunus mume Pm002492 I 0.859
Pm030172 Prunus mume Pm030172 I 0.852
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.860
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.853
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.868
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.827
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.681
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.859
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.852
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.859
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.839
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.867
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.833
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.853
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.859
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.868
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.847
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.830
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.833
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.858
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.821
Si006371m.g Setaria italica Si006371m.g I 0.713
Si012635m.g Setaria italica Si012635m.g I 0.858
Si025305m.g Setaria italica Si025305m.g I 0.858
Si029636m.g Setaria italica Si029636m.g I 0.833
Si036068m.g Setaria italica Si036068m.g I 0.830
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.861
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.868
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.867
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.819
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.857
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
TCM_000665 Theobroma cacao TCM_000665 I 0.865
TCM_022077 Theobroma cacao TCM_022077 I 0.859
TCM_042000 Theobroma cacao TCM_042000 I 0.856
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.827
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.836
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.723
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.856
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.856
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.856
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.707
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.858
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.868
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.859
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.838