GLYMA11G31401 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA11G31401 T001912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.708 0.760
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.701 0.760
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.701 0.760
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.701 0.760
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.686 0.840
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.685 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA11G31401.1 AP2 121 172

Links

Other AP2 family TFs
Other Glycine max TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CRF2 Arabidopsis thaliana AT4G23750 D 0.685
CRF4 Arabidopsis thaliana AT4G27950 D 0.701
CRF3 Arabidopsis thaliana AT5G53290 D 0.708
O65242_TOBAC Nicotiana tabacum O65242_TOBAC D 0.686
Pm000232 Prunus mume Pm000232 I 0.684
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.681
Cagra.1225s0103 Capsella grandiflora Cagra.1225s0103 I 0.701
Cagra.0084s0074 Capsella grandiflora Cagra.0084s0074 I 0.708
Bostr.7867s0626 Boechera stricta Bostr.7867s0626 I 0.709
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.681
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.683
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.699
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.681
Carubv10005229m.g Capsella rubella Carubv10005229m.g I 0.701
Carubv10026682m.g Capsella rubella Carubv10026682m.g I 0.708
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I 0.696
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.707
Bostr.26833s0952 Boechera stricta Bostr.26833s0952 I 0.708
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.697
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.709
Pm013049 Prunus mume Pm013049 I 0.680
Pm019793 Prunus mume Pm019793 I 0.696
28641.m000082 Ricinus communis 28641.m000082 I 0.720
30169.m006542 Ricinus communis 30169.m006542 I 0.707
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.719
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.707
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.707
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.697
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.681
mgf018116m Mimulus guttatus mgf018116m I 0.707
mgf022434m Mimulus guttatus mgf022434m I 0.686
mgf023807m Mimulus guttatus mgf023807m I 0.684
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.701
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.707
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.707
SapurV1A.0013s0740 Salix purpurea SapurV1A.0013s0740 I 0.677
SapurV1A.0215s0310 Salix purpurea SapurV1A.0215s0310 I 0.696
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.713
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.707
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.720
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.707
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.707
SapurV1A.4828s0010 Salix purpurea SapurV1A.4828s0010 I 0.696
Thhalv10013898m.g Eutrema salsugineum Thhalv10013898m.g I 0.708
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.697
PK28823.1 Cannabis sativa PK28823.1 I 0.707
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.686
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I 0.696
MDP0000854039 Malus domestica MDP0000854039 I 0.715
evm.TU.supercontig_2.277 Carica papaya evm.TU.supercontig_2.277 I 0.706
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.709
Gorai.001G156900 Gossypium raimondii Gorai.001G156900 I 0.686
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.707
Gorai.006G208200 Gossypium raimondii Gorai.006G208200 I 0.679
Gorai.007G105600 Gossypium raimondii Gorai.007G105600 I 0.689
Gorai.007G105700 Gossypium raimondii Gorai.007G105700 I 0.692
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.707
Gorai.009G355700 Gossypium raimondii Gorai.009G355700 I 0.708
Lus10027573.g Linum usitatissimum Lus10027573.g I 0.697
Lus10039324.g Linum usitatissimum Lus10039324.g I 0.697
MDP0000190504 Malus domestica MDP0000190504 I 0.678
MDP0000308379 Malus domestica MDP0000308379 I 0.715
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.677
Cla013632 Citrullus lanatus Cla013632 I 0.703
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.697
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.700
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.689
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.707
GLYMA20G33840 Glycine max GLYMA20G33840 I 0.698
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I 0.678
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I 0.689
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.696
OBART03G38710 Oryza barthii OBART03G38710 I 0.683
OGLUM03G38530 Oryza glumaepatula OGLUM03G38530 I 0.683
OMERI03G35630 Oryza meridionalis OMERI03G35630 I 0.683
ONIVA03G40360 Oryza nivara ONIVA03G40360 I 0.683
OPUNC03G35790 Oryza punctata OPUNC03G35790 I 0.680
ORGLA03G0354400 Oryza glaberrima ORGLA03G0354400 I 0.683
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.700
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.692
CRF1 Arabidopsis thaliana AT4G11140 I 0.699
BGIOSGA009571 Oryza indica BGIOSGA009571 I 0.683
Bo2g045930 Brassica oleracea Bo2g045930 I 0.708
Bo3g022760 Brassica oleracea Bo3g022760 I 0.690
Bo3g045150 Brassica oleracea Bo3g045150 I 0.697
Bo9g111050 Brassica oleracea Bo9g111050 I 0.708
Bra003068 Brassica rapa Bra003068 I 0.708
Bra022643 Brassica rapa Bra022643 I 0.708
Bra029079 Brassica rapa Bra029079 I 0.690
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.699
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.681
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.700
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.726
ORUFI03G40350 Oryza rufipogon ORUFI03G40350 I 0.683
OS03G0815800 Oryza sativa OS03G0815800 I 0.683
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.707
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.707
Solyc06g082590.1 Solanum lycopersicum Solyc06g082590.1 I 0.691
TCM_005203 Theobroma cacao TCM_005203 I 0.692
TCM_015336 Theobroma cacao TCM_015336 I 0.707
TCM_032408 Theobroma cacao TCM_032408 I 0.708
TCM_042300 Theobroma cacao TCM_042300 I 0.711
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.714
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.707
Ca_03948 Cicer arietinum Ca_03948 I 0.696
Ca_15671 Cicer arietinum Ca_15671 I 0.692
Cla004291 Citrullus lanatus Cla004291 I 0.697
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.691
CRF3 Arabidopsis lyrata scaffold_801806.1 I 0.708
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.678
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.707
PGSC0003DMG400030472 Solanum tuberosum PGSC0003DMG400030472 I 0.690
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.707
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.707
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.744
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.713
POPTR_0019s15190 Populus trichocarpa POPTR_0019s15190 I 0.696
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.696
PRUPE_ppa022995mg Prunus persica PRUPE_ppa022995mg I 0.684
PRUPE_ppa025495mg Prunus persica PRUPE_ppa025495mg I 0.684
CRF4 Arabidopsis lyrata scaffold_701473.1 I 0.702
Cla011108 Citrullus lanatus Cla011108 I 0.681
Ca_08911 Cicer arietinum Ca_08911 N 0.833
Ca_08913 Cicer arietinum Ca_08913 N 0.833