GSMUA_Achr5G05160_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr5G05160_001 T002392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.731 0.820
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.731 0.820
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.729 0.800
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.729 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P05160_001 AP2 13 64

Links

Other AP2 family TFs
Other Musa acuminata TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo01073s040 Brassica oleracea Bo01073s040 N 0.000
Bo5g041280 Brassica oleracea Bo5g041280 N 0.000
Bo6g099260 Brassica oleracea Bo6g099260 N 0.000
Bo7g065570 Brassica oleracea Bo7g065570 N 0.000
Bo7g065750 Brassica oleracea Bo7g065750 N 0.000
Bo7g101500 Brassica oleracea Bo7g101500 N 0.000
Bo9g163500 Brassica oleracea Bo9g163500 N 0.000
Bo9g181220 Brassica oleracea Bo9g181220 N 0.000
Bostr.0597s0093 Boechera stricta Bostr.0597s0093 N 0.000
Bostr.12302s0059 Boechera stricta Bostr.12302s0059 N 0.000
Bostr.13404s0068 Boechera stricta Bostr.13404s0068 N 0.000
Bostr.25219s0363 Boechera stricta Bostr.25219s0363 N 0.000
Bo4g161430 Brassica oleracea Bo4g161430 N 0.000
Bo4g052050 Brassica oleracea Bo4g052050 N 0.000
Bo01294s010 Brassica oleracea Bo01294s010 N 0.000
Bo04405s010 Brassica oleracea Bo04405s010 N 0.000
Bo1g017840 Brassica oleracea Bo1g017840 N 0.000
Bo1g101740 Brassica oleracea Bo1g101740 N 0.000
Bo1g114890 Brassica oleracea Bo1g114890 N 0.000
Bo2g050430 Brassica oleracea Bo2g050430 N 0.000
Bo2g100490 Brassica oleracea Bo2g100490 N 0.000
Bo2g134150 Brassica oleracea Bo2g134150 N 0.000
Bo3g061460 Brassica oleracea Bo3g061460 N 0.000
Bo3g169160 Brassica oleracea Bo3g169160 N 0.000
Bo4g009340 Brassica oleracea Bo4g009340 N 0.000
Bostr.7867s0394 Boechera stricta Bostr.7867s0394 N 0.000