MTR_5g008550 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g008550 T002878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.717 0.720
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.717 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES93881 AP2 19 70

Links

Other AP2 family TFs
Other Medicago truncatula TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27805.m000021 Ricinus communis 27805.m000021 I 0.690
28118.m000034 Ricinus communis 28118.m000034 I 0.690
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.688
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.679
ERF022 Arabidopsis thaliana AT1G33760 I 0.705
ERF021 Arabidopsis thaliana AT1G71450 D 0.717
Bo2g072910 Brassica oleracea Bo2g072910 I 0.717
Bo5g086680 Brassica oleracea Bo5g086680 I 0.697
Bo6g046850 Brassica oleracea Bo6g046850 I 0.690
Bo6g094210 Brassica oleracea Bo6g094210 I 0.681
Bo6g113020 Brassica oleracea Bo6g113020 I 0.705
Bo8g027240 Brassica oleracea Bo8g027240 I 0.711
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.693
Bra003924 Brassica rapa Bra003924 I 0.681
Bra007975 Brassica rapa Bra007975 I 0.701
Bra010210 Brassica rapa Bra010210 I 0.712
Bra016136 Brassica rapa Bra016136 I 0.707
Bra028009 Brassica rapa Bra028009 I 0.694
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.717
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.693
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.713
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.717
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.711
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.682
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.721
Ca_15064 Cicer arietinum Ca_15064 I 0.778
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.702
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.770
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.717
Cla012661 Citrullus lanatus Cla012661 I 0.705
Cla012665 Citrullus lanatus Cla012665 I 0.736
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.731
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.705
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.699
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.698
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.696
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.732
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.732
F775_17299 Aegilops tauschii F775_17299 I 0.684
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.717
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.724
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.707
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.722
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.702
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.702
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.700
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.726
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.700
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.687
MDP0000122739 Malus domestica MDP0000122739 I 0.714
MDP0000122740 Malus domestica MDP0000122740 I 0.714
MDP0000151428 Malus domestica MDP0000151428 I 0.714
MDP0000283350 Malus domestica MDP0000283350 I 0.693
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.684
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.702
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.717
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.744
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.745
Pm004269 Prunus mume Pm004269 I 0.711
Pm004272 Prunus mume Pm004272 I 0.739
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.728
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.683
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.693
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.729
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.735
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.689
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.711
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.738
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.714
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.693
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.694
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.727
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.727
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.694
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.693
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.698
Si026882m.g Setaria italica Si026882m.g I 0.695
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.739
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.737
TCM_036269 Theobroma cacao TCM_036269 I 0.730
TCM_036270 Theobroma cacao TCM_036270 I 0.690
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.709
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.707
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.684
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.684
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.684
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.684
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.749