MTR_5g008550 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g008550 T002878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.717 0.720
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.717 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES93881 AP2 19 70

Links

Other AP2 family TFs
Other Medicago truncatula TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WUBG_00911 Wuchereria bancrofti WUBG_00911 N 0.000
LOAG_06802 Loa loa LOAG_06802 N 0.000
WBGene00242655 Onchocerca volvulus WBGene00242655 N 0.000
BTMF_0000924701 Brugia timori BTMF_0000924701 N 0.000
GPUH_0001154601 Gongylonema pulchrum GPUH_0001154601 N 0.000
nDi.2.2.2.g06457 Dirofilaria immitis nDi.2.2.2.g06457 N 0.000
nOo.2.0.1.g01042 Onchocerca ochengi nOo.2.0.1.g01042 N 0.000
OFLC_0000290601 Onchocerca flexuosa OFLC_0000290601 N 0.000
TCLT_0001016401 Thelazia callipaeda TCLT_0001016401 N 0.000