OGLUM03G38790 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM03G38790 T003233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.842 0.929
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.834 0.939
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.817 0.909
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.798 0.838
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G38790.1 AP2 121 171
OGLUM03G38790.1 AP2 213 264
OGLUM03G38790.2 AP2 121 152
OGLUM03G38790.2 AP2 194 245

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10005954m.g Capsella rubella Carubv10005954m.g N 0.000
Thhalv10026485m.g Eutrema salsugineum Thhalv10026485m.g N 0.000