ORGLA07G0253000 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA07G0253000 T003934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.716 0.882
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.716 0.882
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA07G0253000.1 AP2 49 100

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29635.m000461 Ricinus communis 29635.m000461 I 0.687
29813.m001543 Ricinus communis 29813.m001543 I 0.685
30084.m000185 Ricinus communis 30084.m000185 I 0.716
30174.m009031 Ricinus communis 30174.m009031 I 0.686
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.713
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.677
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.679
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.712
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.810
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.717
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.679
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.687
Bo2g018360 Brassica oleracea Bo2g018360 I 0.716
Bo3g013830 Brassica oleracea Bo3g013830 I 0.716
Bo9g152440 Brassica oleracea Bo9g152440 I 0.716
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.716
Bra002262 Brassica rapa Bra002262 I 0.716
Bra006518 Brassica rapa Bra006518 I 0.716
Bra020063 Brassica rapa Bra020063 I 0.716
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.802
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.716
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.716
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.684
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.709
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.685
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.683
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.707
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.680
Ca_08232 Cicer arietinum Ca_08232 I 0.716
Ca_10494 Cicer arietinum Ca_10494 I 0.687
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.712
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.716
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.687
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.704
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.685
Cla010474 Citrullus lanatus Cla010474 I 0.684
Cla012318 Citrullus lanatus Cla012318 I 0.702
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.684
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.702
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.708
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.706
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.687
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.716
F775_02727 Aegilops tauschii F775_02727 I 0.687
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.687
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.713
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.702
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.683
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.716
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.696
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.687
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.687
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.716
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.687
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.689
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.716
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.684
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.795
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.683
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.774
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.687
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.794
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.687
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.717
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.717
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.769
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.684
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.704
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.684
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.704
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.720
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.682
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.682
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.722
MDP0000177547 Malus domestica MDP0000177547 I 0.716
MDP0000276536 Malus domestica MDP0000276536 I 0.687
MDP0000525933 Malus domestica MDP0000525933 I 0.705
MDP0000551969 Malus domestica MDP0000551969 I 0.687
mgf022665m Mimulus guttatus mgf022665m I 0.713
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.687
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.810
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.687
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.687
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.679
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.716
OB07G15030 Oryza brachyantha OB07G15030 I 0.717
OBART07G06690 Oryza barthii OBART07G06690 I 0.717
OBART07G19610 Oryza barthii OBART07G19610 I 0.810
OBART12G17080 Oryza barthii OBART12G17080 I 0.687
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.717
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.810
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.687
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.717
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.810
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.680
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.687
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.717
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.810
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.679
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.687
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.712
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.810
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.680
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.687
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.704
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.704
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.685
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.687
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.717
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.687
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.717
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.810
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.680
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.687
OS07G0204000 Oryza sativa OS07G0204000 I 0.717
OS07G0575000 Oryza sativa OS07G0575000 I 0.810
OS12G0582900 Oryza sativa OS12G0582900 I 0.687
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.792
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.719
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.713
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.684
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.684
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.684
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.792
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.684
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.684
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.687
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.679
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.696
PK13330.1 Cannabis sativa PK13330.1 I 0.687
PK25269.1 Cannabis sativa PK25269.1 I 0.692
Pm000004 Prunus mume Pm000004 I 0.705
Pm015931 Prunus mume Pm015931 I 0.687
Pm025326 Prunus mume Pm025326 I 0.716
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.716
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.718
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.716
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.678
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.687
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.716
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.687
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.705
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.716
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.716
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.716
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.690
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.687
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.716
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.706
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.684
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.720
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.683
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.687
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.687
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.687
Si024417m.g Setaria italica Si024417m.g I 0.684
Si030686m.g Setaria italica Si030686m.g I 0.792
Si033237m.g Setaria italica Si033237m.g I 0.720
Si038848m.g Setaria italica Si038848m.g I 0.687
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.679
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.691
TCM_011632 Theobroma cacao TCM_011632 I 0.689
TCM_018659 Theobroma cacao TCM_018659 I 0.687
TCM_025913 Theobroma cacao TCM_025913 I 0.716
TCM_040015 Theobroma cacao TCM_040015 I 0.717
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.716
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.810
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.687
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.687