OS04G0550200 (Oryza sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OS04G0550200 T004176_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.786 0.940
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.786 0.940
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.771 0.900
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.771 0.900
Q8LKX0_MAIZE
M09722_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.758 0.940
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.758 0.880
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.758 0.880
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.758 0.880
Q5MAR7_BRANA
M09742_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII1_01
0.745 0.920
Q3HS44_BRANA
M09741_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII2_01
0.745 0.920
Q3HS43_BRANA
M09740_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII3_01
0.745 0.920
AT3G16280
M06618_2.00
Arabidopsis thaliana
NDNCACCGACANHN

NDNTGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
AT3G16280_col_a
0.735 0.860
AT3G16280
M06619_2.00
Arabidopsis thaliana
BCACCGACAHWNNN

NNNWDTGTCGGTGV
Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a
0.735 0.860
ERF039
M01620_2.00
Arabidopsis thaliana
NNRCCGACDN

NHGTCGGYNN
PBM
Weirauch et al.(2014)
pTH8101
0.729 0.900
ERF039
M06635_2.00
Arabidopsis thaliana
HNNHDYCRCCGMCRN

NYGKCGGYGRHDNND
Dap-seq
OMalley et al.(2016)
At4g16750_col_a
0.729 0.900
ERF039
M06636_2.00
Arabidopsis thaliana
NNNNNNYCACCGACAHH

DDTGTCGGTGRNNNNNN
Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a
0.729 0.900
ERF038
M06608_2.00
Arabidopsis thaliana
NHNHHDYCRCCGACA

TGTCGGYGRHDDNDN
Dap-seq
OMalley et al.(2016)
ERF38_col_a
0.729 0.880
ERF037
M00843_2.00
Arabidopsis thaliana
NRCCGACRN

NYGTCGGYN
PBM
Franco-Zorrilla et al.(2014)
At1g77200
0.718 0.880
ERF037
M06599_2.00
Arabidopsis thaliana
YCRCCGACAHHNNH

DNNDDTGTCGGYGR
Dap-seq
OMalley et al.(2016)
AT1G77200_col_a
0.718 0.880
ERF037
M06600_2.00
Arabidopsis thaliana
NNYACCGACAHN

NDTGTCGGTRNN
Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a
0.718 0.880
Q3HS42_BRANA
M09739_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII4_01
0.702 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS04T0550200-01 AP2 45 96

Links

Other AP2 family TFs
Other Oryza sativa TFs

446 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.000
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.000
ENSAMXG00000007765 Astyanax mexicanus ENSAMXG00000007765 N 0.000
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.000
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.000
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.000
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.000
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.000
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.000
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.000
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.000
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.000
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.000
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.000
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.000
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.000
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.000
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.000
estExt_fgenesh2_pg.C_2010088 Branchiostoma floridae estExt_fgenesh2_pg.C_2010088 N 0.000
MBD2 Sus scrofa ENSSSCG00000004528 I 0.000
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.000
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.000
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.000
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.000
mbd2 Danio rerio ENSDARG00000075952 I 0.000
MBD2 Homo sapiens ENSG00000134046 D 0.000
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.000
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.000
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.000
Mbd2 Mus musculus ENSMUSG00000024513 D 0.000
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.000
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.000
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.000
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.000
mbd2.S Xenopus laevis XB-GENE-493780 I 0.000
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.000
Mbd3 Mus musculus ENSMUSG00000035478 N 0.000
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.000
mbd3.S Xenopus laevis XB-GENE-491557 I 0.000
mbd3a Danio rerio ENSDARG00000061774 I 0.000
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.000