Sb02g006023 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g006023 T004957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.828 0.941
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.828 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g006023.1 AP2 50 101

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA007096 Oryza indica BGIOSGA007096 N 0.000
OPUNC02G03720 Oryza punctata OPUNC02G03720 N 0.000
ORGLA02G0041200 Oryza glaberrima ORGLA02G0041200 N 0.000
OS02G0158400 Oryza sativa OS02G0158400 N 0.000
Sb04g004060 Sorghum bicolor Sb04g004060 N 0.000
Si018290m.g Setaria italica Si018290m.g N 0.000
Traes_6AS_A92DEAA15 Triticum aestivum Traes_6AS_A92DEAA15 N 0.000
Traes_6BS_0A692E6F6 Triticum aestivum Traes_6BS_0A692E6F6 N 0.000
Traes_6DS_1FC471B7F Triticum aestivum Traes_6DS_1FC471B7F N 0.000
Pavir.Aa03265 Panicum virgatum Pavir.Aa03265 N 0.000
ONIVA02G04450 Oryza nivara ONIVA02G04450 N 0.000
OLONG_017077 Oryza longistaminata OLONG_017077 N 0.000
BRADI3G04450 Brachypodium distachyon BRADI3G04450 N 0.000
F775_24520 Aegilops tauschii F775_24520 N 0.000
GRMZM2G012262 Zea mays GRMZM2G012262 N 0.000
GSMUA_Achr9G08300_001 Musa acuminata GSMUA_Achr9G08300_001 N 0.000
LPERR02G03890 Leersia perrieri LPERR02G03890 N 0.000
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.000
OB02G13770 Oryza brachyantha OB02G13770 N 0.000
OBART02G04450 Oryza barthii OBART02G04450 N 0.000
OGLUM02G04370 Oryza glumaepatula OGLUM02G04370 N 0.000
Pavir.Ab00418 Panicum virgatum Pavir.Ab00418 N 0.000