VIT_13s0019g03550 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_13s0019g03550 T006097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.841 0.969
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.837 0.939
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.825 0.949
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.791 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g03550.t01 AP2 164 213
VIT_13s0019g03550.t01 AP2 256 307

Links

Other AP2 family TFs
Other Vitis vinifera TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.000
BGIOSGA014412 Oryza indica BGIOSGA014412 N 0.000
Bo3g032310 Brassica oleracea Bo3g032310 N 0.000
Bo4g029680 Brassica oleracea Bo4g029680 N 0.000
Bra000046 Brassica rapa Bra000046 N 0.000
Bra005127 Brassica rapa Bra005127 N 0.000
BRADI5G20847 Brachypodium distachyon BRADI5G20847 N 0.000
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.000
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.000
Ca_10636 Cicer arietinum Ca_10636 N 0.000
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.000
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.000
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.000
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.000
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.000
gene27722-v1.0-hybrid Fragaria vesca gene27722-v1.0-hybrid N 0.000
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.000
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.000
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N 0.000
GRMZM2G415229 Zea mays GRMZM2G415229 N 0.000
GT-3B Arabidopsis thaliana AT2G38250 N 0.000
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.000
MDP0000269977 Malus domestica MDP0000269977 N 0.000
MDP0000296708 Malus domestica MDP0000296708 N 0.000
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.000
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.000
OGLUM04G24100 Oryza glumaepatula OGLUM04G24100 N 0.000
OMERI04G20000 Oryza meridionalis OMERI04G20000 N 0.000
ONIVA04G23310 Oryza nivara ONIVA04G23310 N 0.000
OPUNC04G21710 Oryza punctata OPUNC04G21710 N 0.000
ORGLA04G0207300 Oryza glaberrima ORGLA04G0207300 N 0.000
ORUFI04G25870 Oryza rufipogon ORUFI04G25870 N 0.000
PK23483.1 Cannabis sativa PK23483.1 N 0.000
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N 0.000
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.000
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.000
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.000
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.000
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.000
TCM_021682 Theobroma cacao TCM_021682 N 0.000
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.000