Ca_04504 (Cicer arietinum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ca_04504 T006292_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.713 0.860
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.713 0.860
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.703 0.860
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.703 0.860
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.703 0.860
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.703 0.860
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.702 0.860
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.702 0.860
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.702 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04504 AP2 44 95

Links

Other AP2 family TFs
Other Cicer arietinum TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DREB1C Arabidopsis thaliana AT4G25470 D 0.702
DREB1A Arabidopsis thaliana AT4G25480 D 0.703
DREB1D Arabidopsis thaliana AT5G51990 D 0.713
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.712
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.755
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.747
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.754
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.755
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.723
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.755
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.748
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.714
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.749
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.755
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.678
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.790
mgf022408m Mimulus guttatus mgf022408m I 0.763
mgf026339m Mimulus guttatus mgf026339m I 0.679
mgf026642m Mimulus guttatus mgf026642m I 0.732
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.713
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.701
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.727
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.701
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.713
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.730
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.701
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.701
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.748
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.710
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.684
MDP0000198054 Malus domestica MDP0000198054 I 0.680
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.790
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.687
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.702
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.690
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.687
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.713
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.713
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.727
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.681
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.681
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.679
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.696
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.691
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.738
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.701
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.685
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.724
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.686
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.681
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.681
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.681
PK23332.1 Cannabis sativa PK23332.1 I 0.738
mgf018934m Mimulus guttatus mgf018934m I 0.763
Bo9g104770 Brassica oleracea Bo9g104770 I 0.713
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.697
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.694
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.717
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.708
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.690
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.683
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.724
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.718
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.678
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.726
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.701
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.692
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.692
Bra028290 Brassica rapa Bra028290 I 0.713
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.709
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.715
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.783
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.790
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.820
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.682
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.681
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.696
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.679
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.713
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.760
30190.m011120 Ricinus communis 30190.m011120 I 0.677
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.717
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.724
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.686
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.688
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.707
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.728
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.690
mgf016974m Mimulus guttatus mgf016974m I 0.763
mgf017136m Mimulus guttatus mgf017136m I 0.682
30147.m014313 Ricinus communis 30147.m014313 I 0.698
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.713
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.745
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.755
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.710
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.708
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.688
Cla002362 Citrullus lanatus Cla002362 I 0.728
Cla006315 Citrullus lanatus Cla006315 I 0.726
Cla011674 Citrullus lanatus Cla011674 I 0.693
Pm023775 Prunus mume Pm023775 I 0.678
mgf018631m Mimulus guttatus mgf018631m I 0.763
Pm023777 Prunus mume Pm023777 N 0.698
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.712
mgf017477m Mimulus guttatus mgf017477m N 0.698