cassava2757.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava2757.m1 T006870_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.872 0.856
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.872 0.856
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.868 0.865
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.868 0.865
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.866 0.865
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.866 0.865
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.819 0.837
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.819 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2757.m1 AP2 255 312
cassava2757.m1 AP2 354 406

Links

Other AP2 family TFs
Other Manihot esculenta TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Max Mus musculus ENSMUSG00000059436 D 0.000
MAX Homo sapiens ENSG00000125952 D 0.000
tetur05g05490 Tetranychus urticae tetur05g05490 I 0.000
TriadG51792 Trichoplax adhaerens TriadG51792 I 0.000
YQE_10562 Dendroctonus ponderosae YQE_10562 I 0.000
Alligator_sinensis_CCG022139.1 Alligator sinensis Alligator_sinensis_CCG022139.1 I 0.000
Cflo_05278--XP_623530.1_APIME Camponotus floridanus Cflo_05278--XP_623530.1_APIME I 0.000
MAX Takifugu rubripes ENSTRUG00000014760 I 0.000
LCUP011850 Lucilia cuprina LCUP011850 I 0.000
ENSBTAP00000023939-D1 Bos grunniens ENSBTAP00000023939-D1 I 0.000
ENSP00000351490 Macaca fascicularis ENSP00000351490 I 0.000
Hsal_16014--XP_623530.1_APIME Harpegnathos saltator Hsal_16014--XP_623530.1_APIME I 0.000
Myotis_brandtii_MAX_10027131 Myotis brandtii Myotis_brandtii_MAX_10027131 I 0.000
TC009976 Tribolium castaneum TC009976 I 0.000
SPU_022163 Strongylocentrotus purpuratus SPU_022163 I 0.000
SINV12716 Solenopsis invicta SINV12716 I 0.000
max Takifugu rubripes ENSTRUG00000017815 I 0.000
ENSTSYG00000007582 Tarsius syrichta ENSTSYG00000007582 I 0.000
MAX Tursiops truncatus ENSTTRG00000002693 I 0.000
ENSXMAG00000014355 Xiphophorus maculatus ENSXMAG00000014355 I 0.000
GB41968 Apis mellifera GB41968 I 0.000
ISCW013570 Ixodes scapularis ISCW013570 I 0.000
KGM_17406 Danaus plexippus KGM_17406 I 0.000
LotgiG133235 Lottia gigantea LotgiG133235 I 0.000
NEMVEDRAFT_v1g80696 Nematostella vectensis NEMVEDRAFT_v1g80696 I 0.000
NV15216 Nasonia vitripennis NV15216 I 0.000
PHUM220200 Pediculus humanus PHUM220200 I 0.000
RPRC015255 Rhodnius prolixus RPRC015255 I 0.000
Ogr08511 Ophisaurus gracilis Ogr08511 I 0.000
Pvit_16227 Pogona vitticeps Pvit_16227 I 0.000
fgenesh2_pg.scaffold_132000064 Branchiostoma floridae fgenesh2_pg.scaffold_132000064 I 0.000
ADIR006501 Anopheles dirus ADIR006501 I 0.000
AEPI003923 Anopheles epiroticus AEPI003923 I 0.000
AFAF015236 Anopheles farauti AFAF015236 I 0.000
AFUN000621 Anopheles funestus AFUN000621 I 0.000
AMEC003172 Anopheles melas AMEC003172 I 0.000
AMEM013272 Anopheles merus AMEM013272 I 0.000
AMIN002759 Anopheles minimus AMIN002759 I 0.000
AQUA008115 Anopheles quadriannulatus AQUA008115 I 0.000
ASIS001309 Anopheles sinensis ASIS001309 I 0.000
ASTEI00681 Anopheles stephensi ASTEI00681 I 0.000
LLOJ003470 Lutzomyia longipalpis LLOJ003470 I 0.000
ACUA001438 Anopheles culicifacies ACUA001438 I 0.000
ACOM035641 Anopheles coluzzii ACOM035641 I 0.000
ACHR003925 Anopheles christyi ACHR003925 I 0.000
gw.35.272.1 Branchiostoma floridae gw.35.272.1 I 0.000
Ocbimv22020257m.g Octopus bimaculoides Ocbimv22020257m.g I 0.000
Sakowv30027986m.g Saccoglossus kowalevskii Sakowv30027986m.g I 0.000
CLEC011217 Cimex lectularius CLEC011217 I 0.000
HHAL010192-PA Halyomorpha halys HHAL010192-PA I 0.000
LDEC015014 Leptinotarsa decemlineata LDEC015014 I 0.000
max.L Xenopus laevis XB-GENE-6252877 I 0.000
max.S Xenopus laevis XB-GENE-6255913 I 0.000
max Xenopus tropicalis XB-GENE-6258209 I 0.000
AALB008732 Anopheles albimanus AALB008732 I 0.000
AARA001274 Anopheles arabiensis AARA001274 I 0.000
MDOA012035 Musca domestica MDOA012035 I 0.000
max Tetraodon nigroviridis ENSTNIG00000016412 I 0.000
CpipJ_CPIJ003297 Culex pipiens CpipJ_CPIJ003297 I 0.000
max Danio rerio ENSDARG00000024844 I 0.000
ENSDNOG00000034422 Dasypus novemcinctus ENSDNOG00000034422 I 0.000
MAX Equus caballus ENSECAG00000006923 I 0.000
MAX Erinaceus europaeus ENSEEUG00000003973 I 0.000
MAX Echinops telfairi ENSETEG00000002967 I 0.000
ENSFALG00000001190 Ficedula albicollis ENSFALG00000001190 I 0.000
MAX Felis catus ENSFCAG00000010347 I 0.000
max Gasterosteus aculeatus ENSGACG00000007808 I 0.000
ENSGALG00000028248 Gallus gallus ENSGALG00000028248 I 0.000
MAX Gorilla gorilla ENSGGOG00000026047 I 0.000
ENSGMOG00000003647 Gadus morhua ENSGMOG00000003647 I 0.000
ENSCSAVG00000010547 Ciona savignyi ENSCSAVG00000010547 I 0.000
ENSCSAG00000013429 Chlorocebus sabaeus ENSCSAG00000013429 I 0.000
ENSCPOG00000010172 Cavia porcellus ENSCPOG00000010172 I 0.000
AAEL012237 Aedes aegypti AAEL012237 I 0.000
ACEP16358 Atta cephalotes ACEP16358 I 0.000
ACYPI005523 Acyrthosiphon pisum ACYPI005523 I 0.000
AGAP003177 Anopheles gambiae AGAP003177 I 0.000
BGIBMGA004944 Bombyx mori BGIBMGA004944 I 0.000
CPIJ003297 Culex quinquefasciatus CPIJ003297 I 0.000
ENSAMEG00000003472 Ailuropoda melanoleuca ENSAMEG00000003472 I 0.000
ENSAMXG00000012675 Astyanax mexicanus ENSAMXG00000012675 I 0.000
MAX Canis familiaris ENSCAFG00000016212 I 0.000
MAX Choloepus hoffmanni ENSCHOG00000006957 I 0.000
MAX Callithrix jacchus ENSCJAG00000019702 I 0.000
ENSLACG00000016665 Latimeria chalumnae ENSLACG00000016665 I 0.000
MAX Loxodonta africana ENSLAFG00000018437 I 0.000
MAX Meleagris gallopavo ENSMGAG00000004785 I 0.000
ENSPFOG00000013150 Poecilia formosa ENSPFOG00000013150 I 0.000
ENSPFOG00000017744 Poecilia formosa ENSPFOG00000017744 I 0.000
ENSPPYG00000005911 Pongo abelii ENSPPYG00000005911 I 0.000
ENSPSIG00000009674 Pelodiscus sinensis ENSPSIG00000009674 I 0.000
MAX Pan troglodytes ENSPTRG00000006449 I 0.000
Max Rattus norvegicus ENSRNOG00000008049 I 0.000
MAX Sorex araneus ENSSARG00000010212 I 0.000
ENSSHAG00000014285 Sarcophilus harrisii ENSSHAG00000014285 I 0.000
ENSSSCG00000002282 Sus scrofa ENSSSCG00000002282 I 0.000
ENSSTOG00000028142 Ictidomys tridecemlineatus ENSSTOG00000028142 I 0.000
MAX Tupaia belangeri ENSTBEG00000012645 I 0.000
MAX Procavia capensis ENSPCAG00000000840 I 0.000
ENSPANG00000020361 Papio anubis ENSPANG00000020361 I 0.000
MAX Oryzias latipes ENSORLG00000016817 I 0.000
ENSMICG00000013124 Microcebus murinus ENSMICG00000013124 I 0.000
MAX Myotis lucifugus ENSMLUG00000004318 I 0.000
MAX Macaca mulatta ENSMMUG00000004341 I 0.000
MAX Monodelphis domestica ENSMODG00000009712 I 0.000
ENSMPUG00000006859 Mustela putorius furo ENSMPUG00000006859 I 0.000
ENSNLEG00000014373 Nomascus leucogenys ENSNLEG00000014373 I 0.000
MAX Ornithorhynchus anatinus ENSOANG00000005841 I 0.000
ENSOARG00000021159 Ovis aries ENSOARG00000021159 I 0.000
MAX Oryctolagus cuniculus ENSOCUG00000014439 I 0.000
ENSOGAG00000034529 Otolemur garnettii ENSOGAG00000034529 I 0.000
MAX Ochotona princeps ENSOPRG00000016245 I 0.000
MAX Tetraodon nigroviridis ENSTNIG00000000407 I 0.000