Cucsa.102560 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.102560 T007011_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-9
M06633_2.00
Arabidopsis thaliana
NNNNNNNDBCACCGACMHH

DDKGTCGGTGVHNNNNNNN
Dap-seq
OMalley et al.(2016)
DEAR5_col_a
0.766 0.920
RAP2-9
M06634_2.00
Arabidopsis thaliana
NCACCGACMHH

DDKGTCGGTGN
Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a
0.766 0.920
ERF010
M06690_2.00
Arabidopsis thaliana
HHNHHDYCACCGHCD

HGDCGGTGRHDDNDD
Dap-seq
OMalley et al.(2016)
DEAR2_col_a
0.765 0.920
ERF010
M06691_2.00
Arabidopsis thaliana
NNNHDBCACCGACAH

DTGTCGGTGVHDNNN
Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a
0.765 0.920
RAP2-10
M00850_2.00
Arabidopsis thaliana
NNRCCGHCNN

NNGDCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DEAR4
0.764 0.920
ERF011
M06628_2.00
Arabidopsis thaliana
YHNHHDYCACCGHCN

NGDCGGTGRHDDNDR
Dap-seq
OMalley et al.(2016)
CEJ1_col_a
0.763 0.880
ERF011
M06629_2.00
Arabidopsis thaliana
NDNCACCGACMHH

DDKGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a
0.763 0.880
ERF008
M00844_2.00
Arabidopsis thaliana
SHRCCGHC

GDCGGYDS
PBM
Franco-Zorrilla et al.(2014)
DEAR3
0.754 0.900
ERF008
M01048_2.00
Arabidopsis thaliana
CRCCGMCN

NGKCGGYG
PBM
Sullivan et al.(2014)
pTH7672
0.754 0.900
ERF008
M06602_2.00
Arabidopsis thaliana
NNNNNBCACCGACAHHN

NDDTGTCGGTGVNNNNN
Dap-seq
OMalley et al.(2016)
DEAR3_col_a
0.754 0.900
ERF008
M06603_2.00
Arabidopsis thaliana
NNBCACCGACAWH

DWTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a
0.754 0.900
RAP2-1
M06582_2.00
Arabidopsis thaliana
NHDYCRCCGMCAH

DTGKCGGYGRHDN
Dap-seq
OMalley et al.(2016)
RAP21_col_a
0.702 0.820
RAP2-1
M06583_2.00
Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN

NNNNNHDDTGTCGGTGVHDN
Dap-seq
OMalley et al.(2016)
RAP21_colamp_a
0.702 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.102560.1 AP2 20 71

Links

Other AP2 family TFs
Other Cucumis sativus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.764
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.702
ERF008 Arabidopsis thaliana AT2G23340 D 0.754
ERF011 Arabidopsis thaliana AT3G50260 D 0.763
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.766
ERF010 Arabidopsis thaliana AT5G67190 D 0.765
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.729
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.755
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.764
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.764
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.747
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.765
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.766
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.768
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.765
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.763
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.765
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.764
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.763
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.747
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.764
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.764
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.764
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.747
mgf025363m Mimulus guttatus mgf025363m I 0.766
mgf021115m Mimulus guttatus mgf021115m I 0.766
mgf006561m Mimulus guttatus mgf006561m I 0.760
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.766
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.724
Ca_01556 Cicer arietinum Ca_01556 I 0.705
Ca_02170 Cicer arietinum Ca_02170 I 0.778
Cla014175 Citrullus lanatus Cla014175 I 0.810
Cla020550 Citrullus lanatus Cla020550 I 0.767
Cla020961 Citrullus lanatus Cla020961 I 0.758
Cla022937 Citrullus lanatus Cla022937 I 0.752
28718.m000038 Ricinus communis 28718.m000038 I 0.775
30170.m013843 Ricinus communis 30170.m013843 I 0.766
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.780
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.766
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.766
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.758
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.767
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.752
mgf000289m Mimulus guttatus mgf000289m I 0.779
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.741
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.764
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.742
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.758
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.742
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.758
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.768
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.766
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.780
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.791
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.791
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.766
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.722
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.765
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.764
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.760
PK15612.1 Cannabis sativa PK15612.1 I 0.749
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.780
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.733
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.764
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.777
MDP0000756341 Malus domestica MDP0000756341 I 0.755
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.777
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.756
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.758
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.758
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.777
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.752
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.776
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.777
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.745
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.777
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.758
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.745
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.778
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.768
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.766
MDP0000125673 Malus domestica MDP0000125673 I 0.776
MDP0000179962 Malus domestica MDP0000179962 I 0.776
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.736
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.691
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.766
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.780
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.746
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.778
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.746
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.780
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.758
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.765
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.752
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.725
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.742
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.722
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.742
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.757
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.738
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.732
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.753
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.763
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.764
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.742
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.742
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.742
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.758
Bo1g004940 Brassica oleracea Bo1g004940 I 0.754
Bo4g151460 Brassica oleracea Bo4g151460 I 0.764
Bo7g063980 Brassica oleracea Bo7g063980 I 0.765
Bo7g118430 Brassica oleracea Bo7g118430 I 0.764
Bo8g079660 Brassica oleracea Bo8g079660 I 0.765
Bo9g020380 Brassica oleracea Bo9g020380 I 0.759
Bra011744 Brassica rapa Bra011744 I 0.757
Bra012140 Brassica rapa Bra012140 I 0.744
Bra014056 Brassica rapa Bra014056 I 0.758
Bra017811 Brassica rapa Bra017811 I 0.764
Bra032173 Brassica rapa Bra032173 I 0.764
Bra036061 Brassica rapa Bra036061 I 0.765
Bra037124 Brassica rapa Bra037124 I 0.759
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.758
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.728
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.716
OS06G0166400 Oryza sativa OS06G0166400 I 0.758
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.767
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.779
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.764
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.766
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.780
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.780
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.766
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.761
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.774
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.742
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.758
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.704
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.764
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.765
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.779
TCM_000669 Theobroma cacao TCM_000669 I 0.777
OS04G0648900 Oryza sativa OS04G0648900 I 0.742
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.758
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.758
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.728
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.751
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.745
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.742
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.758
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.741
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.746
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.705
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.778
OBART06G04460 Oryza barthii OBART06G04460 I 0.758
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.742
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.758
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.742
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.742
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.758
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.758
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.742
TCM_033791 Theobroma cacao TCM_033791 I 0.756