Carubv10010347m.g (Capsella rubella)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Carubv10010347m.g T007854_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.842 1.000
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.842 1.000
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010347m AP2 43 94

Links

Other AP2 family TFs
Other Capsella rubella TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.000
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.000
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.000
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.000
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.000
ASIM_0000224701 Anisakis simplex ASIM_0000224701 N 0.000
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.000
AALB006415 Anopheles albimanus AALB006415 I 0.000
AARA010616 Anopheles arabiensis AARA010616 I 0.000
AATE016215 Anopheles atroparvus AATE016215 I 0.000
ACUA004409 Anopheles culicifacies ACUA004409 I 0.000
ADAC003252 Anopheles darlingi ADAC003252 I 0.000
AEPI010254 Anopheles epiroticus AEPI010254 N 0.000
AFAF011136 Anopheles farauti AFAF011136 I 0.000
AFUN005717 Anopheles funestus AFUN005717 N 0.000
AGAP000281 Anopheles gambiae AGAP000281 I 0.000
AMAM014030 Anopheles maculatus AMAM014030 N 0.000
AMEC012857 Anopheles melas AMEC012857 I 0.000
AMEM006878 Anopheles merus AMEM006878 I 0.000
AMIN005634 Anopheles minimus AMIN005634 N 0.000
ASIS016667 Anopheles sinensis ASIS016667 I 0.000
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.000
GB43084 Apis mellifera GB43084 I 0.000
ACEP19638 Atta cephalotes ACEP19638 I 0.000
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.000
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.000
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.000
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.000
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.000
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.000
Bm4188 Brugia malayi Bm4188 N 0.000
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.000
CBG18873 Caenorhabditis briggsae CBG18873 N 0.000
CRE28315 Caenorhabditis remanei CRE28315 N 0.000
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.000
A1O1_01197 Capronia coronata A1O1_01197 I 0.000
A1O3_08778 Capronia epimyces A1O3_08778 I 0.000
PV04_00198 Capronia semiimmersa PV04_00198 I 0.000
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.000
IGS.gm_15_00221 Chlorella NC64A IGS.gm_15_00221 I 0.000
CLEC001918 Cimex lectularius CLEC001918 I 0.000
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.000
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.000
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.000
G647_10093 Cladophialophora carrionii G647_10093 I 0.000
PV07_09313 Cladophialophora immunda PV07_09313 I 0.000
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.000
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.000
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.000
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.000
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.000
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.000
KGM_14572 Danaus plexippus KGM_14572 I 0.000
tox4b Danio rerio ENSDARG00000100163 I 0.000
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.000
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.000
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.000
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.000
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.000
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.000
A1O9_00742 Exophiala aquamarina A1O9_00742 I 0.000
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.000
PV10_01993 Exophiala mesophila PV10_01993 I 0.000
PV06_04154 Exophiala oligosperma PV06_04154 I 0.000
PV11_09703 Exophiala sideris PV11_09703 I 0.000
PV08_04655 Exophiala spinifera PV08_04655 I 0.000
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.000
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.000
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.000
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.000
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.000
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.000
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.000
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.000
M7I_1578 Glarea lozoyensis M7I_1578 I 0.000
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.000
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.000
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.000
HMEL005034 Heliconius melpomene HMEL005034 I 0.000
HelroG145107 Helobdella robusta HelroG145107 N 0.000
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.000
ISCW015985 Ixodes scapularis ISCW015985 N 0.000
ISCW018867 Ixodes scapularis ISCW018867 I 0.000
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.000
LOAG_18151 Loa loa LOAG_18151 N 0.000
LotgiG109021 Lottia gigantea LotgiG109021 I 0.000
LCUP006200 Lucilia cuprina LCUP006200 N 0.000
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.000
MBM_02410 Marssonina brunnea MBM_02410 I 0.000
MCINX005468 Melitaea cinxia MCINX005468 I 0.000
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.000
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.000
Minc18174 Meloidogyne incognita Minc18174 N 0.000
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.000
mgf006762m Mimulus guttatus mgf006762m N 0.000
e_gw1.1.2450.1 Mucor circinelloides e_gw1.1.2450.1 I 0.000
MDOA008605 Musca domestica MDOA008605 N 0.000
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.000
NV10488 Nasonia vitripennis NV10488 I 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
NCU02819 Neurospora crassa NCU02819 D 0.000
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.000
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.000
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.000
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.000
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.000
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.000
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.000
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.000
tox2 Oryzias latipes ENSORLG00000004818 N 0.000
tox4b Oryzias latipes ENSORLG00000008779 N 0.000
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.000
PHUM393920 Pediculus humanus PHUM393920 N 0.000
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.000
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.000
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.000
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I 0.000
V499_08602 Pseudogymnoascus pannorum V499_08602 I 0.000
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.000
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.000
RPRC000650 Rhodnius prolixus RPRC000650 I 0.000
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.000
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.000
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.000
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.000
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.000
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.000
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.000
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.000
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.000
L892_g13433 Steinernema scapterisci L892_g13433 I 0.000
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.000
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.000
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.000
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.000
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.000
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.000
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.000
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.000
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.000
TCM_014800 Theobroma cacao TCM_014800 N 0.000
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.000
TC012723 Tribolium castaneum TC012723 I 0.000
D917_05048 Trichinella nativa D917_05048 N 0.000
D917_02150 Trichinella nativa D917_02150 N 0.000
EFV52201 Trichinella spiralis EFV52201 N 0.000
EFV56095 Trichinella spiralis EFV56095 N 0.000
EFV61455 Trichinella spiralis EFV61455 N 0.000
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.000
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.000
D918_05288 Trichuris suis D918_05288 N 0.000
D918_03887 Trichuris suis D918_03887 N 0.000
D918_09264 Trichuris suis D918_09264 N 0.000
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.000
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.000
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.000
tox4.S Xenopus laevis XB-GENE-993810 I 0.000
XP_002936155 Xenopus tropicalis XP_002936155 N 0.000
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.000
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.000
L798_00437 Zootermopsis nevadensis L798_00437 N 0.000