Pavir.Ha00307 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ha00307 T009488_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.719 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ha00307.1.p AP2 36 87

Links

Other AP2 family TFs
Other Panicum virgatum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_046280 Acremonium chrysogenum ACRE_046280 I 0.000
AOL_s00004g609 Arthrobotrys oligospora AOL_s00004g609 I 0.000
CADAFLAG00008989 Aspergillus flavus CADAFLAG00008989 I 0.000
nirA Aspergillus nidulans CADANIAG00002651 D 0.000
CADANGAG00013867 Aspergillus niger CADANGAG00013867 I 0.000
EURHEDRAFT_481352 Aspergillus ruber EURHEDRAFT_481352 I 0.000
BAUCODRAFT_39053 Baudoinia compniacensis BAUCODRAFT_39053 I 0.000
BAUCODRAFT_138682 Baudoinia compniacensis BAUCODRAFT_138682 N 0.000
BBA_06883 Beauveria bassiana BBA_06883 I 0.000
BDDG_06646 Blastomyces dermatitidis BDDG_06646 I 0.000
A1O3_04845 Capronia epimyces A1O3_04845 I 0.000
PV04_09653 Capronia semiimmersa PV04_09653 I 0.000
CHGG_04711 Chaetomium globosum CHGG_04711 I 0.000
CTHT_0032940 Chaetomium thermophilum CTHT_0032940 I 0.000
Z519_11440 Cladophialophora bantiana Z519_11440 I 0.000
G647_08026 Cladophialophora carrionii G647_08026 I 0.000
PV07_00058 Cladophialophora immunda PV07_00058 I 0.000
A1O5_10900 Cladophialophora psammophila A1O5_10900 I 0.000
A1O7_09067 Cladophialophora yegresii A1O7_09067 I 0.000
CIMG_09213 Coccidioides immitis CIMG_09213 I 0.000
CPC735_016280 Coccidioides posadasii CPC735_016280 I 0.000
CFIO01_00183 Colletotrichum fioriniae CFIO01_00183 I 0.000
GLRG_07227 Colletotrichum graminicola GLRG_07227 I 0.000
CH063_11489 Colletotrichum higginsianum CH063_11489 I 0.000
Cob_02846 Colletotrichum orbiculare Cob_02846 I 0.000
CSUB01_05654 Colletotrichum sublineola CSUB01_05654 I 0.000
HMPREF1541_10049 Cyphellophora europaea HMPREF1541_10049 I 0.000
H072_2295 Dactylellina haptotyla H072_2295 I 0.000
DOTSEDRAFT_74135 Dothistroma septosporum DOTSEDRAFT_74135 I 0.000
DOTSEDRAFT_75913 Dothistroma septosporum DOTSEDRAFT_75913 N 0.000
DRE_01909 Drechslerella stenobrocha DRE_01909 N 0.000
EPUS_07480 Endocarpon pusillum EPUS_07480 I 0.000
A1O9_08529 Exophiala aquamarina A1O9_08529 I 0.000
PV06_07400 Exophiala oligosperma PV06_07400 I 0.000
PV11_03250 Exophiala sideris PV11_03250 I 0.000
PV08_01595 Exophiala spinifera PV08_01595 I 0.000
PV05_00256 Exophiala xenobiotica PV05_00256 I 0.000
Z517_01923 Fonsecaea pedrosoi Z517_01923 I 0.000
FFUJ_04567 Fusarium fujikuroi FFUJ_04567 I 0.000
FGRRES_16471_M Fusarium graminearum FGRRES_16471_M I 0.000
FOXG_06396 Fusarium oxysporum FOXG_06396 I 0.000
FPSE_07163 Fusarium pseudograminearum FPSE_07163 I 0.000
FVEG_04246 Fusarium verticillioides FVEG_04246 I 0.000
MGG_01518 Magnaporthe oryzae MGG_01518 I 0.000
MBM_00857 Marssonina brunnea MBM_00857 I 0.000
MCYG_05152 Microsporum canis MCYG_05152 I 0.000
MGYG_06191 Microsporum gypseum MGYG_06191 I 0.000
MYCTH_2298994 Myceliophthora thermophila MYCTH_2298994 I 0.000
estExt_Genewise1.C_31155 Mycosphaerella fijiensis estExt_Genewise1.C_31155 I 0.000
fgenesh1_pg.C_chr_12000059 Mycosphaerella graminicola fgenesh1_pg.C_chr_12000059 N 0.000
estExt_Genewise1Plus.C_chr_90305 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_90305 I 0.000
nit-4 Neurospora crassa NCU08294 D 0.000
estExt_Genewise1.C_31209 Neurospora discreta estExt_Genewise1.C_31209 I 0.000
NEUTE1DRAFT_78894 Neurospora tetrasperma NEUTE1DRAFT_78894 I 0.000
OIDMADRAFT_145878 Oidiodendron maius OIDMADRAFT_145878 I 0.000
OCS_03410 Ophiocordyceps sinensis OCS_03410 I 0.000
PABG_04941 Paracoccidioides brasiliensis PABG_04941 I 0.000
PMAA_031240 Penicillium marneffei PMAA_031240 I 0.000
PDE_07492 Penicillium oxalicum PDE_07492 I 0.000
PODANS_6_3660 Podospora anserina PODANS_6_3660 I 0.000
MYCFIDRAFT_95405 Pseudocercospora fijiensis MYCFIDRAFT_95405 I 0.000
GMDG_07670 Pseudogymnoascus destructans GMDG_07670 I 0.000
V499_08062 Pseudogymnoascus pannorum V499_08062 I 0.000
Z518_03222 Rhinocladiella mackenziei Z518_03222 I 0.000
SAPIO_CDS7494 Scedosporium apiospermum SAPIO_CDS7494 I 0.000
SMAC_00922 Sordaria macrospora SMAC_00922 I 0.000
SEPMUDRAFT_151303 Sphaerulina musiva SEPMUDRAFT_151303 I 0.000
SEPMUDRAFT_152192 Sphaerulina musiva SEPMUDRAFT_152192 N 0.000
S40288_02558 Stachybotrys chartarum S40288_02558 I 0.000
S40285_05835 Stachybotrys chlorohalonata S40285_05835 I 0.000
PMAA_031240 Talaromyces marneffei PMAA_031240 I 0.000
TSTA_066900 Talaromyces stipitatus TSTA_066900 I 0.000
THITE_2115412 Thielavia terrestris THITE_2115412 I 0.000
UCRPA7_467 Togninia minima UCRPA7_467 I 0.000
VHEMI00532 Torrubiella hemipterigena VHEMI00532 I 0.000
TEQG_04623 Trichophyton equinum TEQG_04623 I 0.000
H101_04520 Trichophyton interdigitale H101_04520 I 0.000
TESG_03837 Trichophyton tonsurans TESG_03837 I 0.000
GSTUM_00002283001 Tuber melanosporum GSTUM_00002283001 I 0.000
PV09_06735 Verruconis gallopava PV09_06735 I 0.000
VDBG_01257 Verticillium albo atrum VDBG_01257 I 0.000
VDBG_01257 Verticillium alfalfae VDBG_01257 I 0.000
VDAG_08005 Verticillium dahliae VDAG_08005 I 0.000
Mycgr3G75413 Zymoseptoria tritici Mycgr3G75413 I 0.000
Mycgr3G96927 Zymoseptoria tritici Mycgr3G96927 N 0.000