Thhalv10029052m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10029052m.g T010002_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-9
M06633_2.00
Arabidopsis thaliana
NNNNNNNDBCACCGACMHH

DDKGTCGGTGVHNNNNNNN
Dap-seq
OMalley et al.(2016)
DEAR5_col_a
0.789 0.920
RAP2-9
M06634_2.00
Arabidopsis thaliana
NCACCGACMHH

DDKGTCGGTGN
Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a
0.789 0.920
ERF010
M06690_2.00
Arabidopsis thaliana
HHNHHDYCACCGHCD

HGDCGGTGRHDDNDD
Dap-seq
OMalley et al.(2016)
DEAR2_col_a
0.762 0.880
ERF010
M06691_2.00
Arabidopsis thaliana
NNNHDBCACCGACAH

DTGTCGGTGVHDNNN
Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a
0.762 0.880
RAP2-10
M00850_2.00
Arabidopsis thaliana
NNRCCGHCNN

NNGDCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DEAR4
0.761 0.880
ERF011
M06628_2.00
Arabidopsis thaliana
YHNHHDYCACCGHCN

NGDCGGTGRHDDNDR
Dap-seq
OMalley et al.(2016)
CEJ1_col_a
0.760 0.840
ERF011
M06629_2.00
Arabidopsis thaliana
NDNCACCGACMHH

DDKGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a
0.760 0.840
ERF008
M00844_2.00
Arabidopsis thaliana
SHRCCGHC

GDCGGYDS
PBM
Franco-Zorrilla et al.(2014)
DEAR3
0.758 0.880
ERF008
M01048_2.00
Arabidopsis thaliana
CRCCGMCN

NGKCGGYG
PBM
Sullivan et al.(2014)
pTH7672
0.758 0.880
ERF008
M06602_2.00
Arabidopsis thaliana
NNNNNBCACCGACAHHN

NDDTGTCGGTGVNNNNN
Dap-seq
OMalley et al.(2016)
DEAR3_col_a
0.758 0.880
ERF008
M06603_2.00
Arabidopsis thaliana
NNBCACCGACAWH

DWTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a
0.758 0.880
RAP2-1
M06582_2.00
Arabidopsis thaliana
NHDYCRCCGMCAH

DTGKCGGYGRHDN
Dap-seq
OMalley et al.(2016)
RAP21_col_a
0.723 0.820
RAP2-1
M06583_2.00
Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN

NNNNNHDDTGTCGGTGVHDN
Dap-seq
OMalley et al.(2016)
RAP21_colamp_a
0.723 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10029052m AP2 22 73

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AUEXF2481DRAFT_273261 Aureobasidium subglaciale AUEXF2481DRAFT_273261 I 0.000
BAUCODRAFT_29233 Baudoinia compniacensis BAUCODRAFT_29233 I 0.000
Bcin11g02190 Botrytis cinerea Bcin11g02190 I 0.000
BGHDH14_bgh05591 Blumeria graminis BGHDH14_bgh05591 I 0.000
CFIO01_10925 Colletotrichum fioriniae CFIO01_10925 I 0.000
CGGC5_1994 Colletotrichum gloeosporioides CGGC5_1994 I 0.000
CH063_15703 Colletotrichum higginsianum CH063_15703 I 0.000
CHGG_00810 Chaetomium globosum CHGG_00810 I 0.000
CMQ_8059 Grosmannia clavigera CMQ_8059 I 0.000
Cob_01690 Colletotrichum orbiculare Cob_01690 I 0.000
COCMIDRAFT_5248 Bipolaris oryzae COCMIDRAFT_5248 I 0.000
COCSADRAFT_233623 Bipolaris sorokiniana COCSADRAFT_233623 I 0.000
COCVIDRAFT_25726 Bipolaris victoriae COCVIDRAFT_25726 I 0.000
CSUB01_02350 Colletotrichum sublineola CSUB01_02350 I 0.000
CTHT_0059940 Chaetomium thermophilum CTHT_0059940 I 0.000
DOTSEDRAFT_68446 Dothistroma septosporum DOTSEDRAFT_68446 I 0.000
estExt_fgenesh1_pg.C_10183 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10183 I 0.000
estExt_fgenesh2_pg.C_70450 Neurospora discreta estExt_fgenesh2_pg.C_70450 I 0.000
EV44_g4453 Erysiphe necator EV44_g4453 I 0.000
F503_02324 Ophiostoma piceae uamh F503_02324 I 0.000
FFUJ_06567 Fusarium fujikuroi FFUJ_06567 I 0.000
GGTG_10172 Gaeumannomyces graminis GGTG_10172 I 0.000
GLRG_03912 Colletotrichum graminicola GLRG_03912 I 0.000
GMDG_04263 Pseudogymnoascus destructans GMDG_04263 I 0.000
HMPREF1624_05238 Sporothrix schenckii HMPREF1624_05238 I 0.000
LEMA_P054670.1 Leptosphaeria maculans LEMA_P054670.1 I 0.000
M437DRAFT_64191 Aureobasidium melanogenum M437DRAFT_64191 I 0.000
M438DRAFT_355299 Aureobasidium pullulans M438DRAFT_355299 I 0.000
MBM_05757 Marssonina brunnea MBM_05757 I 0.000
MGG_00184 Magnaporthe oryzae MGG_00184 I 0.000
MPH_03255 Macrophomina phaseolina MPH_03255 I 0.000
MYCTH_2296328 Myceliophthora thermophila MYCTH_2296328 I 0.000
NCU03070 Neurospora crassa NCU03070 D 0.000
NEUTE1DRAFT_91411 Neurospora tetrasperma NEUTE1DRAFT_91411 I 0.000
OIDMADRAFT_196475 Oidiodendron maius OIDMADRAFT_196475 I 0.000
PFICI_01477 Pestalotiopsis fici PFICI_01477 I 0.000
PODANS_1_12070 Podospora anserina PODANS_1_12070 I 0.000
PTRG_00906 Pyrenophora triticirepentis PTRG_00906 I 0.000
PTT_20308 Pyrenophora teres PTT_20308 I 0.000
PV09_02505 Verruconis gallopava PV09_02505 I 0.000
SAPIO_CDS3676 Scedosporium apiospermum SAPIO_CDS3676 I 0.000
SBOR_9020 Sclerotinia borealis SBOR_9020 I 0.000
SETTUDRAFT_122108 Setosphaeria turcica SETTUDRAFT_122108 I 0.000
SMAC_02800 Sordaria macrospora SMAC_02800 I 0.000
SPBR_04777 Sporothrix brasiliensis SPBR_04777 I 0.000
SS1G_01567 Sclerotinia sclerotiorum SS1G_01567 I 0.000
THITE_2113433 Thielavia terrestris THITE_2113433 I 0.000
UCRNP2_1205 Neofusicoccum parvum UCRNP2_1205 I 0.000
V499_07400 Pseudogymnoascus pannorum V499_07400 I 0.000
VDAG_08786 Verticillium dahliae VDAG_08786 I 0.000
W97_00691 Coniosporium apollinis W97_00691 I 0.000