CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava4890.m1
(
Manihot esculenta
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
cassava4890.m1
T010561_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava4890.m1
AP2
41
90
SKLKGVISLKSGKWGARIAFKYKAHWLGTYDLEEEAAMAYDRAAIKLQRS
cassava4890.m1
B3
161
275
FRKELTQTDVTHIKGFHIPKEYAMQYFPPLAGVSSAGGGDENGSKSIELTFFDRHCRPWTFRYSYWKSTQTFVFTKGWKHFLRMNNLKPKDCVFFYRCEYQRETQKRVFYMIDAQ
Links
Other
AP2,B3
family TFs
Other
Manihot esculenta
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava33306.m1
Manihot esculenta
cassava33306.m1
N
0.892
28192.m000250
Ricinus communis
28192.m000250
N
0.764