CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc15669
(
Meloidogyne incognita
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Minc15669
T011271_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc15669
AP-2
286
486
ETFCTVPGRLSLLSSTPKYRVTVGEIHRRINPPECLNASVLGGILRRAKSKDGGKSLRDQLKIYGLVLPAGRRKTANVSTLTALVEYEAYNLAKDFHSLCENEFPAKQIADYMSFKSQSSEIQRRKQMLAISRQTLSELMELLRQDRSPVCQGTACRPVLEHSIQQHLTHFSMVTHGFGTPAILAALTAVMSWLNESEKNL
Links
Other
AP-2
family TFs
Other
Meloidogyne incognita
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig53.frz3.gene56
Meloidogyne hapla
MhA1_Contig53.frz3.gene56
N
0.943
ANCCEY_07283
Ancylostoma ceylanicum
ANCCEY_07283
I
0.864
nOo.2.0.1.g09186
Onchocerca ochengi
nOo.2.0.1.g09186
I
0.845
PPA19579
Pristionchus pacificus
PPA19579
I
0.808
GPLIN_001548200
Globodera pallida
GPLIN_001548200
I
0.807
PEQ_0000626601
Parascaris equorum
PEQ_0000626601
I
0.800
ENSGACG00000002672
Gasterosteus aculeatus
ENSGACG00000002672
I
0.795
ENSGMOG00000009513
Gadus morhua
ENSGMOG00000009513
I
0.795
tfap2b
Danio rerio
ENSDARG00000012667
I
0.795
maker-nMf.1.1.scaf01027-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf01027-snap-gene-0.8
N
0.783
ENSSARG00000001996
Sorex araneus
ENSSARG00000001996
I
0.773
D917_08051
Trichinella nativa
D917_08051
I
0.767
genemark-nMf.1.1.scaf12791-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf12791-processed-gene-0.1
I
0.753
MhA1_Contig1235.frz3.gene9
Meloidogyne hapla
MhA1_Contig1235.frz3.gene9
I
0.753
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
I
0.738
GPUH_0002219901
Gongylonema pulchrum
GPUH_0002219901
I
0.730
ENSMEUG00000007703
Macropus eugenii
ENSMEUG00000007703
I
0.726
ECPE_0000534101
Echinostoma caproni
ECPE_0000534101
I
0.716
ASIM_0000382801
Anisakis simplex
ASIM_0000382801
N
0.716
TFAP2D
Microcebus murinus
ENSMICG00000005507
I
0.714
SPER_0000909201
Spirometra erinaceieuropaei
SPER_0000909201
I
0.702
MCINX002204
Melitaea cinxia
MCINX002204
I
0.700