GPUH_0002219901 (Gongylonema pulchrum)
AP-2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03299 (TF_AP-2) IPR013854 GPUH_0002219901 T011398_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AP-2
M03584_2.00 		Drosophila melanogaster
HGCCYSRGGCD
HGCCYSRGGCD		 SELEX
Nitta et al.(2015)
AP-2_1 		0.708 0.708
AP-2
M03585_2.00 		Drosophila melanogaster
HGCCYBVRGGCD
HGCCYBVRGGCD		 SELEX
Nitta et al.(2015)
AP-2_2 		0.708 0.708
AP-2
M03586_2.00 		Drosophila melanogaster
NSCCYBNVRGGCN
NGCCYBNVRGGSN		 SELEX
Nitta et al.(2015)
AP-2_3 		0.708 0.708
AP-2
M03587_2.00 		Drosophila melanogaster
HGCCYNRGGCD
HGCCYNRGGCD		 SELEX
Nitta et al.(2015)
AP-2_4 		0.708 0.708
AP-2
M03588_2.00 		Drosophila melanogaster
HSCCYBVRGGSD
HSCCYBVRGGSD		 SELEX
Nitta et al.(2015)
AP-2_5 		0.708 0.708
AP-2
M03589_2.00 		Drosophila melanogaster
HGCCYBNVRGGCD
HGCCYBNVRGGCD		 SELEX
Nitta et al.(2015)
AP-2_6 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0002219901-mRNA-1 AP-2 74 164

Links

Other AP-2 family TFs
Other Gongylonema pulchrum TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OFLC_0001336001 Onchocerca flexuosa OFLC_0001336001 N 0.955
Bm12958 Brugia malayi Bm12958 N 0.955
LOAG_02576 Loa loa LOAG_02576 N 0.955
nAv.1.0.1.g04089 Acanthocheilonema viteae nAv.1.0.1.g04089 N 0.944
WUBG_08246 Wuchereria bancrofti WUBG_08246 N 0.944
TCLT_0000876801 Thelazia callipaeda TCLT_0000876801 N 0.933
nDi.2.2.2.g01985 Dirofilaria immitis nDi.2.2.2.g01985 N 0.933
TCNE_0001838701 Toxocara canis TCNE_0001838701 N 0.921
nLs.2.1.2.g01550 Litomosoides sigmodontis nLs.2.1.2.g01550 N 0.921
WBGene00237271 Onchocerca volvulus WBGene00237271 N 0.921
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I 0.886
ASIM_0000382801 Anisakis simplex ASIM_0000382801 N 0.853
GPLIN_001548200 Globodera pallida GPLIN_001548200 I 0.842
ACAC_0000770601 Angiostrongylus cantonensis ACAC_0000770601 N 0.831
BXY_1135400 Bursaphelenchus xylophilus BXY_1135400 N 0.831
Hba_16110 Heterorhabditis bacteriophora Hba_16110 N 0.831
NECAME_08596 Necator americanus NECAME_08596 N 0.831
CJA15225 Caenorhabditis japonica CJA15225 N 0.831
CBG02662 Caenorhabditis briggsae CBG02662 N 0.820
ANCCAN_03137 Ancylostoma caninum ANCCAN_03137 N 0.820
OESDEN_04908 Oesophagostomum dentatum OESDEN_04908 N 0.820
genemark-nMf.1.1.scaf12791-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf12791-processed-gene-0.1 I 0.815
MhA1_Contig1235.frz3.gene9 Meloidogyne hapla MhA1_Contig1235.frz3.gene9 I 0.815
TELCIR_24906 Teladorsagia circumcincta TELCIR_24906 I 0.809
HCOI00892700 Haemonchus contortus HCOI00892700 N 0.809
PTRK_0001226700 Parastrongyloides trichosuri PTRK_0001226700 N 0.798
RSKR_0000317700 Rhabditophanes kr3021 RSKR_0000317700 N 0.798
tfap2b Danio rerio ENSDARG00000012667 I 0.795
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I 0.795
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I 0.795
SSTP_0000151700 Strongyloides stercoralis SSTP_0000151700 N 0.787
GPLIN_000656900 Globodera pallida GPLIN_000656900 N 0.787
SVE_0188400 Strongyloides venezuelensis SVE_0188400 N 0.787
L898_g10044 Steinernema monticolum L898_g10044 N 0.775
L889_g15326 Steinernema feltiae L889_g15326 N 0.775
L893_g11991 Steinernema glaseri L893_g11991 N 0.775
L596_g21157 Steinernema carpocapsae L596_g21157 N 0.775
D917_08051 Trichinella nativa D917_08051 I 0.767
RSKR_0000054900 Rhabditophanes kr3021 RSKR_0000054900 N 0.753
TFAP2D Microcebus murinus ENSMICG00000005507 I 0.746
EFV52717 Trichinella spiralis EFV52717 I 0.742
D917_06384 Trichinella nativa D917_06384 I 0.742
Bm4832 Brugia malayi Bm4832 N 0.742
WBGene00238500 Onchocerca volvulus WBGene00238500 N 0.742
EFV52712 Trichinella spiralis EFV52712 I 0.742
WUBG_08739 Wuchereria bancrofti WUBG_08739 N 0.742
BTMF_0001499101 Brugia timori BTMF_0001499101 N 0.742
ASU_10957 Ascaris suum ASU_10957 N 0.742
L892_g25112 Steinernema scapterisci L892_g25112 N 0.742
EFV53100 Trichinella spiralis EFV53100 I 0.742
nOo.2.0.1.g09186 Onchocerca ochengi nOo.2.0.1.g09186 I 0.742
L893_g11990 Steinernema glaseri L893_g11990 N 0.742
L898_g10045 Steinernema monticolum L898_g10045 N 0.742
L596_g21158 Steinernema carpocapsae L596_g21158 N 0.742
Minc15669 Meloidogyne incognita Minc15669 N 0.730
SPAL_0000440800 Strongyloides papillosus SPAL_0000440800 N 0.730
SSTP_0000963500 Strongyloides stercoralis SSTP_0000963500 N 0.730
SSTP_0000790300 Strongyloides stercoralis SSTP_0000790300 N 0.730
SVE_0536700 Strongyloides venezuelensis SVE_0536700 N 0.730
SVE_0648500 Strongyloides venezuelensis SVE_0648500 N 0.730
nAv.1.0.1.g04903 Acanthocheilonema viteae nAv.1.0.1.g04903 I 0.730
SMU15037283 Schmidtea mediterranea SMU15037283 N 0.730
Brh_R009368 Buceros rhinoceros Brh_R009368 I 0.730
ENSMGAG00000014248 Meleagris gallopavo ENSMGAG00000014248 I 0.730
ENSLOCG00000016336 Lepisosteus oculatus ENSLOCG00000016336 I 0.730
TFAP2D Gallus gallus ENSGALG00000019842 I 0.730
ENSFALG00000012770 Ficedula albicollis ENSFALG00000012770 I 0.730
ENSXMAG00000006210 Xiphophorus maculatus ENSXMAG00000006210 I 0.730
tfap2d Takifugu rubripes ENSTRUG00000000856 I 0.730
ENSPFOG00000015857 Poecilia formosa ENSPFOG00000015857 I 0.730
ENSPMAG00000003757 Petromyzon marinus ENSPMAG00000003757 I 0.730
TFAP2D Taeniopygia guttata ENSTGUG00000013264 I 0.730
tfap2d Tetraodon nigroviridis ENSTNIG00000003995 I 0.730
TFAP2D Echinops telfairi ENSETEG00000006632 I 0.730
ENSLACG00000007917 Latimeria chalumnae ENSLACG00000007917 I 0.730
Afo_R012706 Aptenodytes forsteri Afo_R012706 I 0.730
Aan_R002199 Calypte anna Aan_R002199 I 0.730
ENSAPLG00000014639 Anas platyrhynchos ENSAPLG00000014639 I 0.730
Gfo_R000727 Geospiza fortis Gfo_R000727 I 0.730
ENSCING00000003722 Ciona intestinalis ENSCING00000003722 I 0.730
Tal_R008010 Tyto alba Tal_R008010 I 0.730
TFAP2D Erinaceus europaeus ENSEEUG00000012106 I 0.730
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I 0.720
SNAPOd2T00019365001 Oikopleura dioica SNAPOd2T00019365001 I 0.719
TFAP2D Sorex araneus ENSSARG00000009866 I 0.719
MhA1_Contig53.frz3.gene56 Meloidogyne hapla MhA1_Contig53.frz3.gene56 N 0.719
SMTD_0001395301 Schistosoma mattheei SMTD_0001395301 I 0.719
NEMVEDRAFT_v1g31519 Nematostella vectensis NEMVEDRAFT_v1g31519 N 0.719
PTRK_0000198500 Parastrongyloides trichosuri PTRK_0000198500 N 0.719
HmN_000504100 Hymenolepis microstoma HmN_000504100 N 0.719
ECPE_0000534101 Echinostoma caproni ECPE_0000534101 I 0.716
ENSORLG00000017695 Oryzias latipes ENSORLG00000017695 I 0.708
tfap2b Gasterosteus aculeatus ENSGACG00000007277 I 0.708
ENSPANG00000017493 Papio anubis ENSPANG00000017493 N 0.708
ENSLOCG00000000725 Lepisosteus oculatus ENSLOCG00000000725 I 0.708
TFAP2E Macaca mulatta ENSMMUG00000019815 I 0.708
ENSAMXG00000010345 Astyanax mexicanus ENSAMXG00000010345 I 0.708
nRc.2.0.1.g41867 Romanomermis culicivorax nRc.2.0.1.g41867 N 0.708
CGI_10015578 Crassostrea gigas CGI_10015578 I 0.708
tfap2b Tetraodon nigroviridis ENSTNIG00000014239 I 0.708
GE19777 Drosophila yakuba FBgn0237110 I 0.708
GK18142 Drosophila willistoni FBgn0220141 I 0.708
DICVIV_06588 Dictyocaulus viviparus DICVIV_06588 N 0.708
GJ11582 Drosophila virilis FBgn0198839 I 0.708
D915_00208 Fasciola hepatica D915_00208 I 0.708
GE23038 Drosophila yakuba FBgn0240239 I 0.708
ENSMMUP00000026047 Macaca fascicularis ENSMMUP00000026047 I 0.708
AP-2 Drosophila melanogaster FBgn0261953 D 0.708
GA28469 Drosophila pseudoobscura FBgn0249829 I 0.708
GD14977 Drosophila simulans FBgn0186649 I 0.708
GM22388 Drosophila sechellia FBgn0177258 I 0.708
GF23730 Drosophila ananassae FBgn0100724 I 0.708
ENSXMAG00000006217 Xiphophorus maculatus ENSXMAG00000006217 I 0.708
LCUP016885 Lucilia cuprina LCUP016885 I 0.708
GG16206 Drosophila erecta FBgn0108441 I 0.708
GH14383 Drosophila grimshawi FBgn0121859 I 0.708
GI11327 Drosophila mojavensis FBgn0134088 I 0.708
ENSPFOG00000015812 Poecilia formosa ENSPFOG00000015812 I 0.708
GL18109 Drosophila persimilis FBgn0155712 I 0.708
ENSMEUG00000007703 Macropus eugenii ENSMEUG00000007703 I 0.702