ARID3B (Gallus gallus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSGALG00000001376 T014557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN

NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.785 1.000
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN

NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.695 0.895
Arid3a
M00115_2.00
Mus musculus
NDATHADDN

NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.695 0.895
Arid3a
M01660_2.00
Mus musculus
NDATHAADN

NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.695 0.895
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN

NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.695 0.895
Arid3a
M02651_2.00
Mus musculus
ATYAAA

TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.695 0.895
ARID3A
M09766_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.695 0.895
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN

NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.675 0.488
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN

NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.657 0.756
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN

NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.644 0.791
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN

NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.644 0.791
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM

KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.644 0.791
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN

NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.644 0.791
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN

NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.621 0.686
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN

NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.508 0.419
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN

NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000002095 ARID/BRIGHT 227 313

Links

Other ARID/BRIGHT family TFs
Other Gallus gallus TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R011828 Aptenodytes forsteri Afo_R011828 N 0.000
Alligator_sinensis_CCG016737.3 Alligator sinensis Alligator_sinensis_CCG016737.3 N 0.000
Brh_R012327 Buceros rhinoceros Brh_R012327 N 0.000
Cmyd_10021484 Chelonia mydas Cmyd_10021484 N 0.000
NCOA1 Anolis carolinensis ENSACAG00000000619 N 0.000
ENSAMEG00000002653 Ailuropoda melanoleuca ENSAMEG00000002653 N 0.000
ENSAPLG00000013551 Anas platyrhynchos ENSAPLG00000013551 N 0.000
NCOA1 Bos taurus ENSBTAG00000015007 N 0.000
NCOA1 Canis familiaris ENSCAFG00000004075 N 0.000
NCOA1 Choloepus hoffmanni ENSCHOG00000004072 N 0.000
NCOA1 Callithrix jacchus ENSCJAG00000007912 N 0.000
NCOA1 Cavia porcellus ENSCPOG00000001117 N 0.000
ENSCSAG00000008479 Chlorocebus sabaeus ENSCSAG00000008479 N 0.000
NCOA1 Dasypus novemcinctus ENSDNOG00000009924 N 0.000
NCOA1 Equus caballus ENSECAG00000017819 N 0.000
NCOA1 Erinaceus europaeus ENSEEUG00000011176 N 0.000
NCOA1 Echinops telfairi ENSETEG00000013375 N 0.000
ENSFALG00000010745 Ficedula albicollis ENSFALG00000010745 N 0.000
NCOA1 Homo sapiens ENSG00000084676 N 0.000
NCOA1 Gallus gallus ENSGALG00000016617 N 0.000
NCOA1 Gorilla gorilla ENSGGOG00000011279 N 0.000
NCOA1 Loxodonta africana ENSLAFG00000014442 N 0.000
NCOA1 Meleagris gallopavo ENSMGAG00000014153 N 0.000
ENSMICG00000001567 Microcebus murinus ENSMICG00000001567 N 0.000
NCOA1 Myotis lucifugus ENSMLUG00000014119 N 0.000
NCOA1 Macaca mulatta ENSMMUG00000020838 N 0.000
NCOA1 Monodelphis domestica ENSMODG00000015907 N 0.000
ENSMPUG00000014013 Mustela putorius furo ENSMPUG00000014013 N 0.000
ENSNLEG00000000895 Nomascus leucogenys ENSNLEG00000000895 N 0.000
ENSOARG00000018040 Ovis aries ENSOARG00000018040 N 0.000
NCOA1 Oryctolagus cuniculus ENSOCUG00000015422 N 0.000
NCOA1 Otolemur garnettii ENSOGAG00000000754 N 0.000
ENSP00000320940-D1 Bos grunniens ENSP00000320940-D1 N 0.000
ENSP00000385216 Macaca fascicularis ENSP00000385216 N 0.000
ENSPANG00000016229 Papio anubis ENSPANG00000016229 N 0.000
ENSPPYG00000012598 Pongo abelii ENSPPYG00000012598 N 0.000
ENSPSIG00000007514 Pelodiscus sinensis ENSPSIG00000007514 N 0.000
NCOA1 Pan troglodytes ENSPTRG00000011715 N 0.000
NCOA1 Pteropus vampyrus ENSPVAG00000017511 N 0.000
Ncoa1 Rattus norvegicus ENSRNOG00000004068 N 0.000
NCOA1 Sorex araneus ENSSARG00000014416 N 0.000
ENSSHAG00000003234 Sarcophilus harrisii ENSSHAG00000003234 N 0.000
NCOA1 Sus scrofa ENSSSCG00000008581 N 0.000
NCOA1 Tupaia belangeri ENSTBEG00000006393 N 0.000
ENSTSYG00000010360 Tarsius syrichta ENSTSYG00000010360 N 0.000
NCOA1 Tursiops truncatus ENSTTRG00000015113 N 0.000
Myotis_brandtii_NCOA1_10031247 Myotis brandtii Myotis_brandtii_NCOA1_10031247 N 0.000
Pvit_14468 Pogona vitticeps Pvit_14468 N 0.000
ncoa1 Xenopus tropicalis XB-GENE-494349 N 0.000