CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00006471001
(
Oikopleura dioica
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
SNAPOd2T00006471001
T016251_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.431
0.350
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.431
0.300
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00006471001
ARID/BRIGHT
437
517
ERREFIDSVIKFHEDKGQPLKGPPMFNQQPLDLFELYNLVKERGGMNEVTKKKEWTDVVRGLKFQVTPSAGFTLKKQYVKV
Links
Other
ARID/BRIGHT
family TFs
Other
Oikopleura dioica
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10006980
Crassostrea gigas
CGI_10006980
I
0.561
BGLB000541
Biomphalaria glabrata
BGLB000541
I
0.548
ISCW014189
Ixodes scapularis
ISCW014189
I
0.513
Ocbimv22032810m.g
Octopus bimaculoides
Ocbimv22032810m.g
I
0.502
LotgiG131492
Lottia gigantea
LotgiG131492
I
0.502
SPU_023530
Strongylocentrotus purpuratus
SPU_023530
I
0.495
CapteG226262
Capitella teleta
CapteG226262
I
0.479
SMAR006121
Strigamia maritima
SMAR006121
I
0.475
SMAR003184
Strigamia maritima
SMAR003184
I
0.464
Contig1044.0.g66
Oxytricha trifallax
Contig1044.0.g66
I
0.456
Hsal_01939--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01939--XP_395512.3_APIME
N
0.451
ACEP26642
Atta cephalotes
ACEP26642
N
0.451
PHUM080380
Pediculus humanus
PHUM080380
N
0.451
SINV22763
Solenopsis invicta
SINV22763
N
0.451
YQE_09239
Dendroctonus ponderosae
YQE_09239
N
0.451
DAPPUDRAFT_327651
Daphnia pulex
DAPPUDRAFT_327651
N
0.451
Cflo_01219--XP_395512.3_APIME
Camponotus floridanus
Cflo_01219--XP_395512.3_APIME
N
0.451
CLEC012210
Cimex lectularius
CLEC012210
N
0.451
GB44899
Apis mellifera
GB44899
N
0.451
TC013586
Tribolium castaneum
TC013586
N
0.451
HHAL005964-PA
Halyomorpha halys
HHAL005964-PA
N
0.451
ACYPI006497
Acyrthosiphon pisum
ACYPI006497
N
0.439
ASTEI11512
Anopheles stephensi
ASTEI11512
N
0.437
PPAI002183
Phlebotomus papatasi
PPAI002183
N
0.437
AMEM013442
Anopheles merus
AMEM013442
N
0.437
AFAF010393
Anopheles farauti
AFAF010393
N
0.437
LCUP015823
Lucilia cuprina
LCUP015823
N
0.437
AFUN009891
Anopheles funestus
AFUN009891
N
0.437
BGIBMGA010273
Bombyx mori
BGIBMGA010273
N
0.437
GJ24712
Drosophila virilis
FBgn0211788
N
0.437
GK22507
Drosophila willistoni
FBgn0224484
N
0.437
GM15347
Drosophila sechellia
FBgn0170267
N
0.437
GI23637
Drosophila mojavensis
FBgn0146363
N
0.437
GG16758
Drosophila erecta
FBgn0108988
N
0.437
GH15872
Drosophila grimshawi
FBgn0123343
N
0.437
osa
Drosophila melanogaster
FBgn0261885
N
0.437
GA26236
Drosophila pseudoobscura
FBgn0247610
N
0.437
GF23141
Drosophila ananassae
FBgn0100135
N
0.437
osa
Drosophila yakuba
FBgn0041640
N
0.437
KGM_12579
Danaus plexippus
KGM_12579
N
0.437
Sakowv30017861m.g
Saccoglossus kowalevskii
Sakowv30017861m.g
I
0.432
TTHERM_00243900
Tetrahymena thermophila
TTHERM_00243900
D
0.431
GSPATT00004674001
Paramecium tetraurelia
GSPATT00004674001
D
0.431
LDEC011073
Leptinotarsa decemlineata
LDEC011073
I
0.428
AAEL017280
Aedes aegypti
AAEL017280
N
0.426
ACEP22600
Atta cephalotes
ACEP22600
I
0.426