CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00006471001
(
Oikopleura dioica
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
SNAPOd2T00006471001
T016251_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.431
0.350
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.431
0.300
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00006471001
ARID/BRIGHT
437
517
ERREFIDSVIKFHEDKGQPLKGPPMFNQQPLDLFELYNLVKERGGMNEVTKKKEWTDVVRGLKFQVTPSAGFTLKKQYVKV
Links
Other
ARID/BRIGHT
family TFs
Other
Oikopleura dioica
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy