augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 (Meloidogyne floridensis)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 T016485_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.424 0.333
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0-mRNA-1 ARID/BRIGHT 133 220

Links

Other ARID/BRIGHT family TFs
Other Meloidogyne floridensis TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I 0.785
GPLIN_000077900 Globodera pallida GPLIN_000077900 N 0.639
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N 0.599
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N 0.531
WBGene00237224 Onchocerca volvulus WBGene00237224 N 0.531
BTMF_0001195401 Brugia timori BTMF_0001195401 N 0.531
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N 0.531
WUBG_00477 Wuchereria bancrofti WUBG_00477 N 0.531
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N 0.531
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N 0.531
Bm1891 Brugia malayi Bm1891 N 0.531
TCNE_0000128301 Toxocara canis TCNE_0000128301 N 0.531
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N 0.531
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N 0.531
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N 0.531
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N 0.513
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N 0.513
HCOI00324200 Haemonchus contortus HCOI00324200 N 0.513
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N 0.513
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N 0.513
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N 0.513
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N 0.513
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N 0.513
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N 0.508
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N 0.508
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N 0.508
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N 0.508
DME_0001005001 Dracunculus medinensis DME_0001005001 N 0.502
PPA05721 Pristionchus pacificus PPA05721 N 0.499
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N 0.499
NECAME_01002 Necator americanus NECAME_01002 N 0.491
L898_g7337 Steinernema monticolum L898_g7337 N 0.483
L893_g29191 Steinernema glaseri L893_g29191 N 0.483
L892_g19705 Steinernema scapterisci L892_g19705 N 0.483
L889_g180 Steinernema feltiae L889_g180 N 0.483
L596_g4117 Steinernema carpocapsae L596_g4117 N 0.483
CapteG226262 Capitella teleta CapteG226262 I 0.476
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N 0.474
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N 0.471
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N 0.453
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N 0.453
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I 0.447
ARID3B Oryctolagus cuniculus ENSOCUG00000025077 I 0.442
tetur09g05790 Tetranychus urticae tetur09g05790 I 0.442
ARID3B Ochotona princeps ENSOPRG00000002281 I 0.442
CGI_10006980 Crassostrea gigas CGI_10006980 I 0.434
SNAPOd2T00025801001 Oikopleura dioica SNAPOd2T00025801001 I 0.433
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I 0.432
maker-nMf.1.1.scaf01260-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf01260-augustus-gene-0.7 N 0.432
RSKR_0000271300 Rhabditophanes kr3021 RSKR_0000271300 N 0.429
ACYPI009013 Acyrthosiphon pisum ACYPI009013 D 0.424
ACYPI34394 Acyrthosiphon pisum ACYPI34394 I 0.424