CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG13351
(
Caenorhabditis briggsae
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
CBG13351
T016855_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG13351
ARID/BRIGHT
26
112
KMAEFYNSLRLFYKRRWNAQLKLPHVQGVEVNLYRLYDTVMALGGWQKVAAGDKWSDIAEMFGCKDDILCGDHAIKLIYMRYLSKFE
CBG13351
RFX
604
677
ELLTEKWIKQNCVFEPAMSTARGELYAAYVDDLRTYHHSMSGSLAMFSGVMKNLYPDVNFRMAQNGVMIVAQGI
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Caenorhabditis briggsae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
swsn-7
Caenorhabditis elegans
WBGene00007433
N
0.922
CJA02799
Caenorhabditis japonica
CJA02799
N
0.909
CRE02039
Caenorhabditis remanei
CRE02039
N
0.899